Query= MSMg01no377_p09.b1 MSMg01no377_p09.b1 CHROMAT_FILE:
MSMg01no377_p09.b1 PHD_FILE: MSMg01no377_p09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:19 2005
(410 letters)
>mm_chr8_128177445_128178254
Length = 810
Score = 764 bits (395), Expect = 0.0
Identities = 407/411 (99%), Gaps = 1/411 (0%)
Strand = Plus / Plus
Query: 1 cagggagatctctgagttcaaggtcatctgggacaaacaagtcccaaatccaggcatggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 cagggagatctctgagttcaaggtcatctgggacaaacaagtcccaaatccaggcatggt 259
Query: 61 ggcacacacctttaatctgggccacaccttctgctggagacctatgtaaggacattggaa 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ggcacatacctttaatctgggccacaccttctgctggagacctatgtaaggacattggaa 319
Query: 121 gaatgaagattcactctcttcttccagtgcttgccttgtgggactgagcaactgctagat 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 320 gaatgaagattcactctcttcttcaagtgcttgccttgtgggactgagcaactgctagat 379
Query: 181 ccttggacttccattcacaactgctgctgaccattgttggggtaggactgtaagtcatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ccttggacttccattcacaactgctgctgaccattgttggggtaggactgtaagtcatca 439
Query: 241 acaaattcccttactctatagagactactc-ataagttctgtgactctagagaaccctga 299
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 440 acaaattcccttactctatagagactactctataagttctgtgactctagagaaccctga 499
Query: 300 ctaatacactgagtaaagtgctagccctgtaagcctaaggccaggctaggtgtcacggca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 500 ctaatacactgagtaaagtgctagccctgtaagcctaaggccaggctaggtgtcatggca 559
Query: 360 catgcttaaatctcagctctggggagttggagataggtagagacaagagga 410
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 catgcttaaatctcagctctggggagttggagataggtagagacaagagga 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_p09.g1 MSMg01no377_p09.g1 CHROMAT_FILE:
MSMg01no377_p09.g1 PHD_FILE: MSMg01no377_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:19 2005
(168 letters)
>mm_chr8_128347920_128348487
Length = 568
Score = 275 bits (142), Expect = 1e-78
Identities = 160/166 (96%)
Strand = Plus / Minus
Query: 1 tgtaagcgagtgctgaatctggtacatgggcgctcttcagtaaatgttggttgaatgaac 60
||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 428 tgtaaccgagtgctgaatctggtacatgggtgctcttcagtaaatgttggttgaatgaac 369
Query: 61 agacaatttgcccgttgtgctgtaaagtcacagaaggaagggagggtccctgaaggctgg 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 368 aaacaatttgcccgttgtgctgtaaagtcacagaaggaagggagggtccctgaaagctgg 309
Query: 121 tgtgtgcagggggttggggggagaacctagggaggtagagggcagg 166
|||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 308 tgtgtgcagggggttggggggagaacataggaaggtagagggcagg 263
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 168
Length of database: 568
Length adjustment: 8
Effective length of query: 160
Effective length of database: 560
Effective search space: 89600
Effective search space used: 89600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
