Query= MSMg01no378_j19.b1 MSMg01no378_j19.b1 CHROMAT_FILE:
MSMg01no378_j19.b1 PHD_FILE: MSMg01no378_j19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:08 2005
(503 letters)
>mm_chr8_90089127_90090029
Length = 903
Score = 905 bits (468), Expect = 0.0
Identities = 495/508 (97%), Gaps = 9/508 (1%)
Strand = Plus / Minus
Query: 1 gaatagtggaaagagtagggggtagggcccattgggaggagtaggttcctgtgggtatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gaatagtggaaagagtagggggtagggcccattgggaggagtaggttcctgtgggtatgt 637
Query: 61 agtaagggcaatagcttacccctccctttctggtgttttctcttct---tcctgctgtta 117
|||||||||||||||||||||||||||||||||||||||||||||| | ||||| |
Sbjct: 636 agtaagggcaatagcttacccctccctttctggtgttttctcttcttcct---gctgtca 580
Query: 118 tgatatgaactgctcttcttcactgcacactcctcactacaatggcctgaactcaccgga 177
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 579 tgatatgaacggctcttcttcactgcacactcctcactacaatggcctgaactcactgga 520
Query: 178 aacacggcccaaaggaatcttccctcccttcagtttctgataggtgctgccccagtgcac 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aacacggcccaaaggaatcttccctcccttcagtttctgataggtgctgccccagtgcac 460
Query: 238 agggagccaccaaattatgggcaaaatcagggttgcaggcctgacccagtgaaagaggaa 297
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 agggagccaccaaattaggggcaaaatcagggttgcaggcctgacccagtgaaagaggaa 400
Query: 298 tggagaaccaagggtctcctcccatgaaagacctgccacccttcttcagaaatctagatg 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tggagaaccaagggtctcctcccatgaaagacctgccacccttcttcagaaatctagatg 340
Query: 358 cttctggggcacatggtgatggatggagatttgtgctttaaatgtaaatttgtttccttt 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 cttctggggcacatggtgatggatggagatttgtgctttaaatgtaaatttgtttccttt 280
Query: 418 ctaggtttcaaattatttatactgcagcctacttgcaaggcaaagctgctgaaacagtag 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ctaggtttcaaattatttatactgcagcctacttgcaaggcaaagctgctgaaacagtag 220
Query: 478 gacatcatctctctgaaag---atgggg 502
||||||||||||||||||| ||||||
Sbjct: 219 gacatcatctctctgaaaggagatgggg 192
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no378_j19.g1 MSMg01no378_j19.g1 CHROMAT_FILE:
MSMg01no378_j19.g1 PHD_FILE: MSMg01no378_j19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:08 2005
(459 letters)
>mm_chr8_89907016_89907874
Length = 859
Score = 864 bits (447), Expect = 0.0
Identities = 456/459 (99%)
Strand = Plus / Plus
Query: 1 agatatctgctccccaacatgtcctggggagaacgagttaggagagcagacaggacttca 60
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 agatatccgctccccaacatgtcctggggagaatgagttaggagagcagacaggacttca 260
Query: 61 ggctttcttcttcttcttcttctttttttccctgcagcagctgctaacgttgttttggag 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 ggctttcttcttcttcttcttcttttttttcctgcagcagctgctaacgttgttttggag 320
Query: 121 ctgtctggggtgcagtcgggacaacattgatcatccccacagtgctttgtgtttctacgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtctggggtgcagtcgggacaacattgatcatccccacagtgctttgtgtttctacgt 380
Query: 181 ctcactcatttgttatctgcacggctgggtttttggccgtcaatattttgggtgaagaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcactcatttgttatctgcacggctgggtttttggccgtcaatattttgggtgaagaga 440
Query: 241 gacatcttcctctaatgacgcctaatcatccctaatttcctctgcaaggattgtgcacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacatcttcctctaatgacgcctaatcatccctaatttcctctgcaaggattgtgcacca 500
Query: 301 tcaggtataatgagcacatttgctttaatgctcctgctgcacagagttcctgggaaatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcaggtataatgagcacatttgctttaatgctcctgctgcacagagttcctgggaaatgg 560
Query: 361 ttcgaaggcacgtgcacaagtcaactgcggggagcttgggaacagcagtgacatgggagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcgaaggcacgtgcacaagtcaactgcggggagcttgggaacagcagtgacatgggagt 620
Query: 421 gactggggggtcagcaggtgcccagaggacactatagcc 459
|||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gactggggggtcagcaggtgcccagaggacactatagcc 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
