Query= MSMg01no379_n24.b1 MSMg01no379_n24.b1 CHROMAT_FILE:
MSMg01no379_n24.b1 PHD_FILE: MSMg01no379_n24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:45 2005
(448 letters)
>mm_chr8_54584445_54585290
Length = 846
Score = 787 bits (407), Expect = 0.0
Identities = 435/445 (97%), Gaps = 2/445 (0%)
Strand = Plus / Plus
Query: 4 ggaattctttccttatcactggtgttttcactttcctcttcatcattggtgtctatggct 63
||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||
Sbjct: 204 ggaattctttccttaaaattggtgttttcactttcctcttcatcattggtgtc--tggct 261
Query: 64 ctcaaaattggtacaaaatcggccttggcttttctccagttatcacaatagctgcaccaa 123
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctcaaaattggtacaaaatcggcattggcttttctccagttatcacaatagctgcaccaa 321
Query: 124 actatattctcaatagcttcacaaagagcatattgagatagaatgcattcctggtgttgt 183
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 actgtattctcaatagcttcacaaagagcatattgagatagaatgcattcctggtgttgt 381
Query: 184 gaggtttaggataaagtgttcatggtcccagtaccctggttggaatccatccaaagtgtg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gaggtttaggataaagtgttcatggtcccagtaccctggttggaatccatccaaagtgtg 441
Query: 244 gtagggtaagtcaccaatatactttcctcttggtttatttgttattgtagctgtgggtat 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 atagggtaagtcaccaatatactttcctcttggtttatttgttattgtagctgtgggtat 501
Query: 304 gatggctaatttatccattgttcctgctgctatagatatggttgttgatgaaggtgatga 363
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 502 gatggctaatttatccattgttcctgatgctatagatatggttgttgatgaaggtgatga 561
Query: 364 tgtctccaattgtgatgagtacaatggtgttgatgatggtggcatgaacaataatgtcaa 423
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 562 tgtctccaattgtgatgagtacaatggtgttgatgatggtggcattaacaataatgtcaa 621
Query: 424 agagcctgagctagactcattgggc 448
|||||||||||||||||||||||||
Sbjct: 622 agagcctgagctagactcattgggc 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 846
Length adjustment: 10
Effective length of query: 438
Effective length of database: 836
Effective search space: 366168
Effective search space used: 366168
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no379_n24.g1 MSMg01no379_n24.g1 CHROMAT_FILE:
MSMg01no379_n24.g1 PHD_FILE: MSMg01no379_n24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:45 2005
(395 letters)
>mm_chr8_54759482_54760276
Length = 795
Score = 665 bits (344), Expect = 0.0
Identities = 350/352 (99%)
Strand = Plus / Minus
Query: 44 agactgatgcatggtgcctgagcacaggtaatcagctacatagtagaatttagatttaaa 103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 agactgatgcatggtgcctgagcacaggtaatcagctacatagtagaatttagatttaaa 736
Query: 104 aaattggttatcttaagttatgattctaggcatcaaagagcctagctttatggccaaggt 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 aaattggttatcttaagttatgattctaggcatcaaagagcctagctttatggccaaggt 676
Query: 164 atatacaaatatattttgagtctgagtcttatttctggaagcaaggggctaagaggaaga 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 atatacaaatatattttgagtctgagtcttatttctggaagcaaggggctaagaggaaga 616
Query: 224 gtcagtccccaacttcaacacatccccagtggttcaactaatcattatctcctaatagaa 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gtcagtccccaacttcaacacatccccagtggttcaactaatcattatctcctaatagaa 556
Query: 284 ggggtattttctatttttctatttaatctctctcttcaagaatatttatactaaacttta 343
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 555 gggatattttctatttttctatttaatctctttcttcaagaatatttatactaaacttta 496
Query: 344 tttttacattgagttctgacctatattaagactagcagtagttaataaacaa 395
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tttttacattgagttctgacctatattaagactagcagtagttaataaacaa 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 795
Length adjustment: 9
Effective length of query: 386
Effective length of database: 786
Effective search space: 303396
Effective search space used: 303396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
