MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-382N18
Chromosome	8 (Build37)
Map Location	44,164,913 - 44,165,189
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Zfp353, EG620772, LOC628212
Downstream gene	Triml1, LOC622082, EG622117, LOC100039417, Zfp42, Adam26b, Adam26a, EG384813, Adam34, EG384814, LOC100039472, LOC547011, LOC622263
Link	Open Mouse BAC browser

Click to get alignment info.

name	Zfp353 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234203 MGI:2387419
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG620772 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620772 MGI:3643972
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 mRNAs, 666 ESTs, 8 Proteins

name	LOC628212 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:628212
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 43 Proteins pseudo : _no_value

name	Triml1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244448 MGI:2687279
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC622082 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622082
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins pseudo : _no_value

name	EG622117 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622117 MGI:3642989
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins

name	LOC100039417 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039417
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	Zfp42 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22702 MGI:99187
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adam26b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382007 MGI:3588304
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adam26a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13525 MGI:105985
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG384813 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384813 MGI:3647273
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adam34 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:252866 MGI:2181992
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG384814 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384814 MGI:3647274
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039472 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039472
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC547011 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:547011
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC622263 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622263
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Zfp353 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120407055 GeneID:234203 MGI:2387419
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 353 transcript_id : NM_153096.2

name	EG620772 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383390 GeneID:620772 MGI:3643972
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 mRNAs, 666 ESTs, 8 Proteins product : predicted gene, EG620772, transcript variant 1 transcript_id : XM_885460.2

name	Triml1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368411 GeneID:244448 MGI:2687279
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tripartite motif family-like 1 transcript_id : NM_177742.3

name	EG622117 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149258730 GeneID:622117 MGI:3642989
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins product : predicted gene, EG622117 transcript_id : XM_886530.3

name	Zfp42 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33457357 GeneID:22702 MGI:99187
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 42 transcript_id : NM_009556.2

name	Adam26b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:57222279 GeneID:382007 MGI:3588304
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin and metallopeptidase domain 26B transcript_id : NM_001009547.1

name	Adam26a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21955287 GeneID:13525 MGI:105985
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin and metallopeptidase domain 26A (testase 3) transcript_id : NM_010085.1

name	EG384813 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68989259 GeneID:384813 MGI:3647273
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG384813 transcript_id : NM_001025240.1

name	Adam34 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68989248 GeneID:252866 MGI:2181992
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin and metallopeptidase domain 34 transcript_id : NM_145745.1

name	EG384814 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121247242 GeneID:384814 MGI:3647274
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG384814 transcript_id : NM_001079931.1

name	Zfp353 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120407056 CCDS:CCDS22264.1 GeneID:234203 MGI:2387419
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger protein 353 protein_id : NP_694736.2

name	EG620772 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82917245 GeneID:620772 MGI:3643972
definition	codon_start : 1 product : similar to Cofilin-1 (Cofilin, non-muscle isoform) isoform 1 protein_id : XP_890553.1

name	Triml1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244234 CCDS:CCDS22266.1 GeneID:244448 MGI:2687279
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : tripartite motif family-like 1 protein_id : NP_808410.1

name	EG622117 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149258731 GeneID:622117 MGI:3642989
definition	codon_start : 1 product : hypothetical protein protein_id : XP_891623.3

name	Zfp42 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7110739 CCDS:CCDS22267.1 GeneID:22702 MGI:99187
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : zinc finger protein 42 protein_id : NP_033582.1

name	Adam26b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:57222280 CCDS:CCDS22268.1 GeneID:382007 MGI:3588304
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : a disintegrin and metalloprotease domain 26b protein_id : NP_001009547.1

name	Adam26a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21955288 CCDS:CCDS22269.1 GeneID:13525 MGI:105985
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005178 - integrin binding [Evidence ISS]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence ISS]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : disintegrin 4; testase 3 product : a disintegrin and metalloprotease domain 26 protein_id : NP_034215.1

name	EG384813 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68989260 GeneID:384813 MGI:3647273
definition	codon_start : 1 function : proteolytic enzyme product : testase 6 protein_id : NP_001020411.1

name	Adam34 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68989249 CCDS:CCDS22271.1 GeneID:252866 MGI:2181992
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : testase 4; a disintegrin and metalloprotease domain 34 (testase 4) product : a disintegrin and metalloprotease domain 34 protein_id : NP_665688.1

name	EG384814 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121247243 GeneID:384814 MGI:3647274
definition	codon_start : 1 product : hypothetical protein LOC384814 protein_id : NP_001073400.1

name	LOC628212 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:628212
definition	number : 1 pseudo : _no_value

name	LOC628212 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:628212
definition	number : 2 pseudo : _no_value

name	LOC628212 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:628212
definition	number : 3 pseudo : _no_value

name	LOC100039417 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039417
definition	number : 1 pseudo : _no_value

name	LOC100039417 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039417
definition	number : 2 pseudo : _no_value

name	LOC100039472 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039472
definition	number : 3 pseudo : _no_value

name	LOC100039472 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039472
definition	number : 2 pseudo : _no_value

name	LOC100039472 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039472
definition	number : 1 pseudo : _no_value

name	LOC547011 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547011
definition	number : 1 pseudo : _no_value

name	LOC622263 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622263
definition	number : 2 pseudo : _no_value

name	LOC622263 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622263
definition	number : 1 pseudo : _no_value

name	LOC622082 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258727 GeneID:622082
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins product : similar to bromodomain adjacent to zinc finger domain, 2A pseudo : _no_value transcript_id : XR_030892.1

clone name	MSMg01-109F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325J11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-515P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096D11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-548A03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-330N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401A14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-401G21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-097M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079M07
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-382N18.T7 (MSMg01no382_n18.b1)	MSMg01-382N18.TJ (MSMg01no382_n18.g1)
ACC	AG486663	AG486664
length	754	753
length of high quality (start - end)	281 (39 - 319)	506 (63 - 568)
definition	CHROMAT_FILE: MSMg01no382_n18.b1 PHD_FILE: MSMg01no382_n18.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:24:43 2005	CHROMAT_FILE: MSMg01no382_n18.g1 PHD_FILE: MSMg01no382_n18.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:24:43 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAG TTATGACACTTCATGTACTTTCTTCTGTCTTACACCCACTTCTCCCAACA TTCTTGTACAGGGCCTGGTATAAAAAACTTAAGGGAGGAGGATTTTTGTT GTTGTTATTGTTGTTTTTGTTTGTTTCATGGCATCAGATGGTTCAGGTCC CACACACTTACTTGTGTAGAACATGATGATGACAGAATGGATGATGGAGA AGATTCTTTACCTCAAGGTGCTCACGCAGTACGGAGACATTAAAAACAAG GAAGAACAAGGCACAACCTTCAAGGATTTGTCCCCAGTCTTCCAGGTAGG TACCATATAAATTTTCTACCGTCTCTTTAATAGCAGTATCACGTTGGGAG TCAGTTGGCGCTAATATTGGCCACATAGAATGCTTCAGATTCCCATTACC ATTTGTTTTCTCCTCCTTCCATTGTTGATGAGAATGAAAATTGGGTCTCA TCATTTATCTTACATAACCAGACATTTCCTTAAAAGCCATGTTCTTGACC GATCCTCACACACTGACTATAAAATGTTTCACACCACATCCATTTCAACA CACCGAATACACGTTCAGTAACAACCTCTCCCTATTTGCTCACAACCCGA AATTATTTTAACTTCCTCCCATCAAACAAGAAAACCCACTCTCCCCCCAC TTTTCCTTCCTTCCCCCCCTCATTCCCCCTCCCCGGTGGTTCCATTCCAT CATG	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXCTGATCTTTCCAACACTTTTATCACTTTTATCATGAAT GGGTGTTGGATCTTGTCAAATGCTTTTTCTGCATCTAACGAGATGATCAT GTGGTTTTTGTCTTTGAGTTTGTTTATATAATGGATTACATTGATGGATT TTCGTATATTAAACCATCCCTGCATCCCTGGATTAAAACCTACTTGGTCT GGATGGATGATTGCTTTAATGTGTTCTTGGATTTGGTTAGCGAGAATTTT ATTGAGGATTTTTGCATCGATATTCATAAGAGAAATTGGTCTGAAGTTCT CTATCTTTGTTGGGTCTTTCTGTTGTTTAGGTATCAGAGTAATAGTGGCT TCATAAAATGAGTTGGGTAGAGTACCTTCTACTTCTATTTTGTGAAATAG TTTGTGCAGAACTGGAATTAGATCTTCTTTGAAGTTCTGATAGAACTCTG CACTAAACCCATCTGGTCCTGGGCTTTTTTTTGGCTGGGAGACTATTAAT AACTGCTTCTATTTTTTATGGGATATGGGACTGTTTAGATGTTTAACTTG ATCCTGATTTAACTTTGGTACCGGCCTTCTGTCCAGAAATTTTGTCATTT TTTTCCATGTTTTCCTGATTTTGTTGAATATAGCCCCTTGGAATAGGATC CTACGTGTTTTCTGGTTATCTCCCTCCCACGACGTTATTTACAACCTATT AAT
quality values	Open. Hide. 19 19 21 19 30 30 27 23 16 19 10 8 8 17 19 37 37 37 21 16 10 10 10 21 19 10 9 9 9 9 9 16 23 27 27 18 18 18 29 31 59 59 30 26 24 28 23 22 20 21 30 33 28 28 19 15 11 10 10 11 14 18 22 33 33 41 50 50 53 53 53 57 57 57 57 57 57 57 57 59 42 37 23 23 23 42 43 68 68 68 68 68 68 51 42 42 42 47 50 50 50 51 68 68 68 68 50 50 50 50 50 50 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 48 48 42 42 42 48 57 68 68 68 68 68 68 68 68 68 57 50 50 50 50 57 57 57 57 57 68 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 57 57 59 57 57 57 57 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 57 59 59 59 59 59 59 59 59 59 27 27 11 11 18 27 38 52 50 50 36 36 36 50 43 57 44 44 28 28 28 43 32 32 19 24 24 32 24 19 19 32 32 20 20 20 38 38 57 68 68 57 57 47 57 39 35 35 20 15 15 21 11 11 20 26 36 43 37 31 28 20 12 19 12 8 8 8 22 28 54 54 54 27 28 13 13 13 28 34 28 30 17 17 12 34 25 25 11 19 15 30 30 48 37 37 21 19 15 15 20 28 16 15 10 10 10 22 28 30 17 15 18 30 30 59 59 59 59 59 59 59 59 59 50 53 50 50 43 43 43 43 43 34 34 12 26 21 40 43 40 40 25 25 25 36 36 57 57 57 57 59 34 34 14 14 14 34 34 54 54 54 54 54 32 32 13 13 13 28 21 30 26 26 18 11 11 23 23 30 17 17 17 25 25 37 37 39 43 28 25 12 9 9 9 12 14 17 20 24 31 22 22 9 9 9 13 13 15 15 15 15 20 31 32 43 22 22 11 9 9 11 11 11 8 8 8 8 8 21 21 23 10 10 10 15 16 28 16 12 12 16 27 32 32 32 23 22 18 15 11 10 11 10 10 11 16 21 25 28 23 32 20 20 11 11 11 20 20 28 28 26 23 16 11 9 9 9 12 14 16 21 15 24 23 28 28 18 20 21 19 11 10 9 9 9 10 13 13 11 11 11 11 10 11 12 16 12 16 17 16 11 11 15 13 13 11 10 10 13 13 21 16 11 9 9 10 9 9 11 8 6 6 6 6 8 10 8 8 8 13 8 8 8 8 8 8 10 10 15 14 12 9 8 8 11 19 23 15 14 16 16 19 11 10 8 8 8 8 8 10 8 8 8 8 8 8 15 9 9 9 6 8 7 6 8 8 12 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 7 6 8 6 12 10 12 12 8 8 8 8 8 8 8 8 8 8 12 12 11 8 8 8 8 8 6 7 7 8 8 8 8 10 12 11 16 12 11 11 11 11 8 8 8 8 8 11 8 6 8 8 9 8 7 9 9 10 16 18 14 10 10 10 10 10 12 9 8 8 10 12 8 9 9 8 10 8 8 8 8 10 16 15 14 15 11 11 11 16 16 12 10 10 10 13 12 15 10 10 10 10 10 16 12 10 18 15 10 9 9 10 8 8 6 6 8 8 11 10 10 10 8 8 8 8 8 8 8 8 8 8 6	Open. Hide. 15 15 21 21 34 39 43 44 39 39 39 39 39 44 41 39 25 23 8 7 7 10 10 8 21 13 15 15 27 23 37 37 32 32 39 23 23 20 30 24 30 39 42 41 44 34 33 19 18 25 26 36 36 26 26 41 23 28 24 29 36 35 48 41 41 37 37 37 37 39 24 19 10 10 12 23 28 30 33 50 50 50 41 53 53 53 53 53 53 53 53 42 42 40 40 40 50 53 53 53 53 53 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 50 50 50 50 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 68 68 68 68 68 68 68 62 62 47 43 35 43 43 62 62 68 68 68 62 62 62 62 62 62 62 62 62 62 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 68 59 59 59 59 59 68 68 59 68 68 68 59 59 59 59 59 59 59 59 59 57 57 57 57 57 57 57 54 54 54 57 57 52 52 52 57 57 57 59 59 59 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 54 57 59 54 48 48 57 57 57 57 57 57 43 28 25 12 12 21 28 42 57 59 57 57 57 59 59 43 43 39 39 39 43 57 59 31 28 17 17 30 30 37 48 41 47 41 39 39 39 39 36 36 39 31 31 35 39 39 39 34 32 28 23 23 34 34 31 34 38 39 39 39 37 37 41 41 37 34 22 20 28 28 24 20 25 22 22 12 19 19 30 28 34 26 29 32 30 30 22 22 20 23 23 34 34 46 43 37 32 21 16 10 10 9 10 10 15 13 8 8 8 15 15 14 16 12 21 18 19 19 17 17 8 8 8 8 8 8 9 16 16 11 10 11 10 8 8 8 8 8 12 16 14 11 10 13 12 10 10 13 12 14 10 9 10 8 8 8 8 6 8 6 6 8 8 9 15 10 9 9 9 10 8 8 8 11 9 8 10 8 8 8 8 8 19 12 18 14 18 15 17 12 6 6 8 8 21 21 15 8 8 8 8 8 9 11 11 11 11 11 13 11 13 13 11 11 8 10 9 9 8 8 8 10 10 12 8 8 8 8 8 9 11 12 11 8 10 10 8 6 6 6 6 8 11 14 9 7 8 8 9 9 11 11 8 8 8 9 8 10 10 8 8 8 8 8 8 8 8 7 8 8 10 8 13 8 6 6 8 6 6 8 8 10 10 11 11 11 11

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no382_n18.b1 MSMg01no382_n18.b1 CHROMAT_FILE:
MSMg01no382_n18.b1 PHD_FILE: MSMg01no382_n18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:43 2005
         (281 letters)



>mm_chr8_44164883_44165563
          Length = 681

 Score =  520 bits (269), Expect = e-152
 Identities = 275/277 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagttatgacacttcatgtactttcttctgtcttacacccacttctcccaacatt 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gaattcagttatgacatttcatgtactttcttctgtcttacacccacttctcccaacatt 248

                                                                       
Query: 65  cttgtacagggcctggtataaaaaacttaagggaggaggatttttgttgttgttattgtt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 cttgtacagggcctggtataaaaaacttaagggaggaggatttttgttgttgttattgtt 188

                                                                       
Query: 125 gtttttgtttgtttcatggcatcagatggttcaggtcccacacacttacttgtgtagaac 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 gtttttgtttgtttcatggcatcagatggttcaggtcccacacacttacttgtgtagaac 128

                                                                       
Query: 185 atgatgatgacagaatggatgatggagaagattctttacctcaaggtgctcacgcagtac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 127 atgatgatgacagaatggatgatggagaagattctttacctcaaggtgctcacgcagtag 68

                                                
Query: 245 ggagacattaaaaacaaggaagaacaaggcacaacct 281
           |||||||||||||||||||||||||||||||||||||
Sbjct: 67  ggagacattaaaaacaaggaagaacaaggcacaacct 31


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space:   182784
Effective search space used:   182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information