Query= MSMg01no384_e24.b1 MSMg01no384_e24.b1 CHROMAT_FILE:
MSMg01no384_e24.b1 PHD_FILE: MSMg01no384_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:35 2005
(549 letters)
>mm_chr8_78065788_78066736
Length = 949
Score = 669 bits (346), Expect = 0.0
Identities = 370/378 (97%), Gaps = 1/378 (0%)
Strand = Plus / Minus
Query: 173 gtattaactggttatcattgtttaactaattggg-aaaatcttcaaaaactgaatctact 231
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 949 gtattaactgtttatcattgtttaactaattgggaaaaatcttcaaaaactgaatctact 890
Query: 232 tatgaaccagaccttctgtttccttatggaaaagataataccacttaccaaaagatacaa 291
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 tatgaaccagaccttctgtctccttatggaaaagataataccacttaccaaaagatacaa 830
Query: 292 gtaagaatgatcacagtaacactaagtaaaattgaaataataggaacaactcaaatgtcc 351
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 gtaagaatgatcacagtagcactaagtaaaattgaaataataggaacaactcaaatgtcc 770
Query: 352 accaaaaggaggataaataatctaaacattacgtacacagtgaaagatttgcagccttga 411
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 accaaaaaaaggataaataatctaaacattacgtacacagtgaaagatttgcagccttga 710
Query: 412 cactggacttaatcaaagataattggtcctcacagataatcttaaagaacgtaactcagc 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 cactggacttaatcaaagataattggtcctcacagataatcttaaagaacgtaactcagc 650
Query: 472 ataaagagtatacaatttatgctttagtggataaaaggttcaaatctaagtattacaacc 531
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 649 ataaagaggatacaatttatgctttagtggataaaaggttcaaatctaagtatcacaacc 590
Query: 532 tctaaggagaaagtttag 549
||||||||||||||||||
Sbjct: 589 tctaaggagaaagtttag 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_e24.g1 MSMg01no384_e24.g1 CHROMAT_FILE:
MSMg01no384_e24.g1 PHD_FILE: MSMg01no384_e24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:35 2005
(514 letters)
>mm_chr8_77936080_77936993
Length = 914
Score = 986 bits (510), Expect = 0.0
Identities = 513/514 (99%)
Strand = Plus / Plus
Query: 1 ttcaccagcatctgagcctcagccagtagaatgcatttatcccccaaatcccatctcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcaccagcatctgagcctcagccagtagaatgcatttatcccccaaatcccatctcact 260
Query: 61 tcttaaggttcagatcatgcctcactacatggaataaagcacacaagttatttcaccaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttaaggttcagatcatgcctcactacatggaataaagcacacaagttatttcaccaag 320
Query: 121 gatcatttgagactgtttttactgagctataacacttgggggatgactctcttccttcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatcatttgagactgtttttactgagctataacacttgggggatgactctcttccttcag 380
Query: 181 gcactcatcattgatcttttggacccacctgttggtcaggttccttttgcttgaagaggt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acactcatcattgatcttttggacccacctgttggtcaggttccttttgcttgaagaggt 440
Query: 241 tcacatcagagcacagccccccgccattacttctgcacccacaactgcctctggacatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcacatcagagcacagccccccgccattacttctgcacccacaactgcctctggacatgg 500
Query: 301 gactcaagctccatgctcaccacctgaacttcattaccccactttaaaagctgtaacact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gactcaagctccatgctcaccacctgaacttcattaccccactttaaaagctgtaacact 560
Query: 361 atttcagcattcccacctggactgcaattctgtggacctcatttttccaatttaaaacta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atttcagcattcccacctggactgcaattctgtggacctcatttttccaatttaaaacta 620
Query: 421 ctggttaaataaaaatggctaaagccaattattgggaagaacaaaataggtggagtttga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctggttaaataaaaatggctaaagccaattattgggaagaacaaaataggtggagtttga 680
Query: 481 gttactgggctgggggtcacaagttgggaccatt 514
||||||||||||||||||||||||||||||||||
Sbjct: 681 gttactgggctgggggtcacaagttgggaccatt 714
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
