XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAAATA
TAACGCACAGTTATTCCCAGAGGATTCAATATAAAGATGATAAGATGAAA
AGGGTACCAGGGAAAAAAAACCCTCAAGTCCTCCTCATTAAACCATTTAT
TGCTGTGTGGGGCCTGAATGAACTGCCAGCTTTAGATAAAGTGTTTTACT
TTGGGAGGATGTATTGTGTTTAAAACCACAGGGTAAACTTGAGATAACTT
TTCACAATGGCAATGTATCTGATGATCAAAAAGAAAAGGGGCTTGTGTGT
CTATTAAGCAATGGTTATATAACTAAAGTCATTTTTGCATCAAACATAGG
ATTTTGTGAATGTTTTCACCTTTGGCTGTTGCCCTACAGGGTTCTTTATA
ACAACAACAAAAATCAATCACTGAAACGAGAGAGAAAAGAGCTTAAAAAG
AAAAGGAAGAAGGAAATAAGAAGCAAGAAACTAGTCTAAAGCTAGCCATG
ATTCGAAAACAACAACAAAAACAACAACAAAAACTTCAGAGCCTCTGTTC
TTGGCTTTAACCTTCATAGATAGATTTTCTGCAGTATTGAATTTCAGCAA
TATTGAATGGCTTAATCAAAAGTGTTTATTCCTTTTGTCTGCGTCTACAA
CAAATCAATGAGGGTGCTTATTTTTAACATCCTAATCCTTTACTACACAT
AATTTTCTCCAATCTTATGACTCGAATTTCTTATTTCTACGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTTAGATGTTTTAAGAAACCATTGTGTAGTGGATTGG
TCTGGTGTTTGCTAAATACTGTGATCCTCACATATACCAGCTTTTGTGTG
CAAACTCTTTGCTTCCCGAGTTATCACTAATTCGTTAATAAAGATGCCTA
TGGCCTGGGCAGGGCAGAAGAAAGTGGGCGGAGTGAAGGTTCTCAGGTCT
GGGGTCTCAGGGACCTGACAGAGCAAGGAGGCGAGAGAGAAGGAAAGAAG
TTGCCATTGGATAGGTGGATTGTGAGCTCATGGCCATGAGGTGGACACCT
GCTGGAATAAGAGCGGACCAGGATACACATGGCAAGTGATAACTCGGGCT
TATTGACTGGGAAGTAGACAAACTAGTATAGAGGCCTGATATCTGCTCAA
CTCAAATGCTTTAAGGCTTATTATAAATGTACAATTTTTTTCTGTCTTTT
ATTTGAGAACTACATGTTCTAAGGGGGTTTAAAAAGTCCTGAAAAATTTT
TACTGCCACAGTCATTTCTTAAACTTTTACCTCACAGGAATTTTGGTGAC
AATCATCTTCTATTATTTTTTTAAGGCAAATTCTAATCTTCTAAAGGTTT
TCTCTGGTTAATTTATTTTGAATATTATTTCTTCATCCGGTATTTTTAAT
CTTCCCTCTCCAAAATTTTTAAGCCTCTTATCTCAACCCCAAATTTCCTT
ATTGTCTCTAC

Query= MSMg01no384_g01.b1 MSMg01no384_g01.b1 CHROMAT_FILE:
MSMg01no384_g01.b1 PHD_FILE: MSMg01no384_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:40 2005
         (560 letters)



>mm_chr8_64378931_64379889
          Length = 959

 Score =  835 bits (432), Expect = 0.0
 Identities = 530/584 (90%), Gaps = 39/584 (6%)
 Strand = Plus / Minus

                                                                       
Query: 12  aaatataacgcacagttattcccagaggattcaatataaagatgataagatgaaaagggt 71
           ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 aaataaaaagcacagttattcccagaggattcaatataaagatgataagatgaaaagggt 753

                                                                       
Query: 72  accagggaaaaaaaaccctcaagtcctcctcattaaaccatttattgctgtgtggggcct 131
           ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 752 accaggggaaaaaaaccctcaagtcctcctcactaaaccatttattgctgtgtggggact 693

                                                                       
Query: 132 gaatgaactgccagctt--------------tagataaagtgttttactttgggaggatg 177
           ||||||||||| |||||              |||||||||||||||||||||||||||||
Sbjct: 692 gaatgaactgctagcttccgttcccaaaatttagataaagtgttttactttgggaggatg 633

                                                                       
Query: 178 tattgtgtttaaaaccacagggtaaacttgagataacttttcacaatggcaatgtatctg 237
           ||||||||||||||||||||||||||||||||||| |||   ||||||||||||||||||
Sbjct: 632 tattgtgtttaaaaccacagggtaaacttgagatacctt---acaatggcaatgtatctg 576

                                                                       
Query: 238 atg---------atcaaaaagaaaaggggcttgtgtgtctattaagcaatggttatataa 288
           |||         ||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 575 atgtatctgatgatcaaaaagaaaaggagcttgtgtgtctgttaagcaatggttatataa 516

                                                                       
Query: 289 ctaaagtcatttttgcatcaaacataggattttgtgaatgttttcacctttggctgttgc 348
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ctaaagtcatttt-gcatcaaacataggattttgtgaatgttttcacctttggctgttgc 457

                                                                       
Query: 349 cctacagggttctttataacaacaacaa---------aaatcaatcactgaaacgagaga 399
           ||||||||||||||||||||||||||||         |||||||||||||||| ||||||
Sbjct: 456 cctacagggttctttataacaacaacaacaacaaaaaaaatcaatcactgaaatgagaga 397

                                                                       
Query: 400 gaaaagag--cttaaaaagaaaaggaagaaggaaataagaagcaagaaactagtctaaag 457
           ||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 396 gaaaagagagcttaaaaagaaaaggaagaaggaaataagaagcaagaaattagtctaaag 337

                                                                       
Query: 458 ctagccatgattcgaaaacaacaacaaaaacaacaacaaaaa-cttcagagcctctgttc 516
           ||||||||||||| ||||||||||||| |||||||||||||| || ||||||||||||||
Sbjct: 336 ctagccatgattctaaaacaacaacaacaacaacaacaaaaaactccagagcctctgttc 277

                                                       
Query: 517 ttggctttaaccttcatagatagattttctgcagtattgaattt 560
           ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 276 ttggctttaaccttcgtagatagattttctgcagtattgaattt 233


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 959
Length adjustment: 10
Effective length of query: 550
Effective length of database: 949
Effective search space:   521950
Effective search space used:   521950
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)