Query= MSMg01no389_n02.b1 MSMg01no389_n02.b1 CHROMAT_FILE:
MSMg01no389_n02.b1 PHD_FILE: MSMg01no389_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:32 2005
(270 letters)
>mm_chr8_26651217_26651889
Length = 673
Score = 433 bits (224), Expect = e-126
Identities = 250/260 (96%), Gaps = 3/260 (1%)
Strand = Plus / Plus
Query: 2 gaattcaatccctaccacttctgtaataggagaaggggtgactccgctccacaaagttgt 61
|||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 202 gaattcaatccccagaacttctgtaatgggagaaggggtgactccgctccacaaagttgt 261
Query: 62 cctttggcttccacgggtgtaggggg---ggtgggtgtgcacatacagaatgacaataaa 118
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 262 cctttggcttccacgggtgtagggggtggggtgggtgtgcacatacagaatgacaataaa 321
Query: 119 gaatttttaaaaatgctttagtacatccaacctactctatatcatagtttggcccacttt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gaatttttaaaaatgctttagtacatccaacctactctatatcatagtttggcccacttt 381
Query: 179 aaatgtgtttgcccgacttccttcaacctgaagcttggccaaagcaggaaacatagagcc 238
||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 382 aaatgtgtttgccggacttccttttacctgaagcttggccaaagcaggaaacatagagcc 441
Query: 239 taatcttagccaatggagga 258
||||||||||||||||||||
Sbjct: 442 taatcttagccaatggagga 461
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 673
Length adjustment: 9
Effective length of query: 261
Effective length of database: 664
Effective search space: 173304
Effective search space used: 173304
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no389_n02.g1 MSMg01no389_n02.g1 CHROMAT_FILE:
MSMg01no389_n02.g1 PHD_FILE: MSMg01no389_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:32 2005
(423 letters)
>mm_chr8_26851434_26852257
Length = 824
Score = 760 bits (393), Expect = 0.0
Identities = 416/427 (97%), Gaps = 7/427 (1%)
Strand = Plus / Minus
Query: 1 tctgtagccagagaggacaatcgcactatgaaatgcagtgtctctaatccatagcagagt 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 624 tctgtagccagagaggacaatcgcactatgaaatgcagtgtctctaatctgtagcagagt 565
Query: 61 cagaaaac----taatcaatgaggaagagtttgcaaggggtcggaaggggggggggtggg 116
|||||||| |||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 564 cagaaaaccaagtaatcaatgaggaagagtttgcaaggggtcggaa---gcgggggtggg 508
Query: 117 aaattggaaagattctctgtgttgattttcttacatttgtaattggcttataatgttttg 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aaattggaaagattctctgtgttgattttcttacatttgtaattggcttataatgttttg 448
Query: 177 tataaaggacagccaatgtcttagaaattgtcccttcttctattttacttataggttcgc 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tataaaggacagccaatgtcttagaaattgtcccttcttctattttacttataggttcgc 388
Query: 237 ttatattgtttgatatcctaacaaatcagaaaaattctattggggatattgacagtgaaa 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ttatattgtttgatatcctaacaaatcagaaaaattctattggggatattgacagtgaaa 328
Query: 297 aggtaatttggaagtttagataggttcttttgtagtattctgtactaaggatttttagat 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aggtaatttggaagtttagataggttcttttgtagtattctgtactaaggatttttagat 268
Query: 357 ttccagcctttcttttgtgtttagctatttagtcttatgccatgttaaatgtacatttat 416
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ttccagcctttcttttgtatttagctatttagtcttatgccatgttaaatgtacatttat 208
Query: 417 tgtaaca 423
|||||||
Sbjct: 207 tgtaaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 824
Length adjustment: 9
Effective length of query: 414
Effective length of database: 815
Effective search space: 337410
Effective search space used: 337410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
