Query= MSMg01no390_l17.b1 MSMg01no390_l17.b1 CHROMAT_FILE:
MSMg01no390_l17.b1 PHD_FILE: MSMg01no390_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:44 2005
(415 letters)
>mm_chr8_78273305_78274119
Length = 815
Score = 779 bits (403), Expect = 0.0
Identities = 412/415 (99%)
Strand = Plus / Minus
Query: 1 tatttcttctattggctctgatcccctaagatacttcccactgttttcttctcatcttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tatttcttctattggctctgatcccctaagatacttcccactgttttcttctcatcttct 556
Query: 61 actgacttggagaaagtcattggtcttcataccagtctctccttctaagcctcatcttag 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 555 actgacttggagaaagtcattgctcttcataccagtctctccttctaagcctcatcttag 496
Query: 121 ttacaatgttgctaaactttctggattcatttttgttccagaggttatgaatgactacta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ttacaatgttgctaaactttctggattcatttttgttccagaggttatgaatgactacta 436
Query: 181 ttctttctgacagcaggaaataatacaattcaattatataagatataaaaactgaccaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ttctttctgacagcaggaaataatacaattcaattatataagatataaaaactgaccaca 376
Query: 241 aagaacattattgctctgcctcagtagaaaaccatagcaaacttctaaaataatgtttta 300
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aagaacattaaagctctgcctcagtagaaaaccatagcaaacttctaaaataatgtttta 316
Query: 301 ttgaatcgatttatttatttcatagttagtacttgagtaaagagaaagaccataggttaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ttgaatcgatttatttatttcatagttagtacttgagtaaagagaaagaccataggttaa 256
Query: 361 acactgttttctatactttaaaacactagcaaacaagacaggggttataatctaa 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 acactgttttctatactttaaaacactagcaaacaagacaggggttataatctaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_l17.g1 MSMg01no390_l17.g1 CHROMAT_FILE:
MSMg01no390_l17.g1 PHD_FILE: MSMg01no390_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:44 2005
(466 letters)
>mm_chr8_78055164_78056030
Length = 867
Score = 835 bits (432), Expect = 0.0
Identities = 458/467 (98%), Gaps = 1/467 (0%)
Strand = Plus / Plus
Query: 1 ttctatgcaggatgattggctctgctttttaaatgagtatcttgatttctgttaatgagc 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 ttctatgcaggatgattggctctgcttcttaaatgagtatcttgatttctgttaatgagc 260
Query: 61 tatttaaagatataaaaaaattaattcgctctcagcctcctgctatatcattttaatctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatttaaagatataaaaaaattaattcgctctcagcctcctgctatatcattttaatctt 320
Query: 121 acatatatagctcttaataaaaagcattctattctaagttgattttattttgtgcagtcc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 acatatatagctcttaataaaaagcattctattctaagttgattttattttgtgcaatcc 380
Query: 181 tagttttttccatagaaaggaaaatgctggaagagctagcatgtctagttgccccatgct 240
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 tagttttttccgtagaaaggaaaatactggaagagctagcatgtctagttgccccatgct 440
Query: 241 actgtcgtcatgccattcccattagtgcatttcatgctttttggtcaccccattctctac 300
|| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 accgtcgtcatgccattcccattagtgcatttcatgctttttggtcgccccattctctac 500
Query: 301 tatttcttcttctgtgtggggcttacaaagccttcatgcttcccctggatgttggggcgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatttcttcttctgtgtggggcttacaaagccttcatgcttcccctggatgttggggcgt 560
Query: 361 tatcattgcccagccatatctgagtctgtgctcagcttgcacttgcctatttgtccctcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatcattgcccagccatatctgagtctgtgctcagcttgcacttgcctatttgtccctcc 620
Query: 421 ctcctctcccttctcatttccttttttt-ggncgctagaatttagga 466
|||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 621 ctcctctcccttctcatttccttttttttggttgctagaatttagga 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 867
Length adjustment: 10
Effective length of query: 456
Effective length of database: 857
Effective search space: 390792
Effective search space used: 390792
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
