XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTT
AGCTGATGACATTTGAATGGCTGAGAAGCACATAAAGAAATGTTCAAGAT
CCTTAGTCATCAGGGAAATTCAAATCAAAAAACCCTGAGATTCCACCTCA
CACCAGTCAGAATGGCTAAGATCAAAAGCTCAGATAAAAGAAGATGCTGG
AGAGGATATGGAGAAAGAGGAACACTCCTCCATTGCTGGTGGGATTGCAA
GCTTGTACAACCACTCTGGAAATCAAGTTGGCGGCTCCTCTAAAAATTGG
ACATAGTACTACCTGAGGACCCAGCTATACTACTTCTGGGCATATACTCA
GAAATTCCTTCAACATGCAATAAGGACACATACTCCACTATGTTCATAGT
AGCCATATTTTTATTAGATATTTTCTACATTTACATGTCAAATGCTATCC
CCTTTGCTAGTTTACTCTCAGAAAATCCCCTATACCCTTCCCTGCCCCCA
TGCTAATCAACCCATCCAATCATGCTTCCTGGCCCTGGCATTCCCCTATA
CTGGGACATAGAATCTTTGCCAGACCAAGGGCCTCTCCCCCCGTTAATGG
CTGACTAGGCCATCCTCTGCTATATATGCCGCTAGAGCCATGAGTCCCCC
CCCGTGCTTTCCCTGATGGGTGGNTTAGCCCCCAGTAGCCCCGGGGCTAC
CCGCGTAATCCTTATTATTGCACCCCCCATAGGCGGGTAAC

NNNCCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTAGTTCATAGAACCTTAA
TTTAAGCCTGACTTTGATAGACTTGGACATTAGTATAATGTTTCCTATGC
AAATACCGAGGGTCTTGTCTGAGCAACTGATACCCATAAATCTGATAATG
GTAGAGATTCTGTTAGTTCTAATCATTGCTAATTTATTTAAATCCCCAAG
AAAGTTTCTGAATAGATCTGTGAATCTTATACTGTACCCAACTAATATTA
TTTTAGTAAAAGTGAACACTGACTATATCTACATAGTACATTAACATATG
AATAAATTTGTCACCCAGTTGCTCTTTGCTTTAGAAAGAGGGTCTTGCCA
GTTCTGGACAATTGGCTTTAGCTTGAAGAATAGGTTCATATCATTGAGAA
AGAGGGGCATGGAAATCTTCTGTGATAAGCCCTATTCTCCAACACCCCCT
GTCAAAGTAACAGCCTAAACAGGAAGGCATCATGTAGAACTTTTAAATGA
GATAAGACTGCTGAAGTGTGGCTCCTCCGAACTGATAGGTCTGATGGAAG
TTGAACTGGAACAAGAACCCACTTTCTCTACTGGTCCTTAGGATCTTACC
CCCCTTTACGGCGGTTTCCCATCCTAACCGCCCCCGCCTTTGTTGCCCAC
CTCCCTTTTCCCCCCCACTCTTCTCGCCCTTTCTTCCTCTTCCCTCCCCT
TTTCTCTTG

Query= MSMg01no391_a08.g1 MSMg01no391_a08.g1 CHROMAT_FILE:
MSMg01no391_a08.g1 PHD_FILE: MSMg01no391_a08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:06 2005
         (437 letters)



>mm_chr8_39198402_39199237
          Length = 836

 Score =  822 bits (425), Expect = 0.0
 Identities = 434/437 (99%), Gaps = 1/437 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctagttcatagaaccttaatttaagcctgactttgatagacttggacattagtataatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tctagttcatagaaccttaatttaagcctgactttgatagacttggacattagtataatg 503

                                                                       
Query: 61  tttcctatgcaaataccgagggtcttgtctgagcaactgatacccataaatctgataatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tttcctatgcaaataccgagggtcttgtctgagcaactgatacccataaatctgataatg 443

                                                                       
Query: 121 gtagagattctgttagttctaatcattgctaatttatttaaatccccaagaaagtttctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gtagagattctgttagttctaatcattgctaatttatttaaatccccaagaaagtttctg 383

                                                                       
Query: 181 aatagatctgtgaatcttatactgtacccaactaatattattttagtaaaagtgaacact 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aatagatctgtgaatcttatactgtacccaactaatattattttagtaaaagtgaacact 323

                                                                       
Query: 241 gactatatctacatagtacattaacatatgaataaatttgtcacccagttgctctttgct 300
           ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gacta-acctacatagtacattaacatatgaataaatttgtcacccagttgctctttgct 264

                                                                       
Query: 301 ttagaaagagggtcttgccagttctggacaattggctttagcttgaagaataggttcata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttagaaagagggtcttgccagttctggacaattggctttagcttgaagaataggttcata 204

                                                                       
Query: 361 tcattgagaaagaggggcatggaaatcttctgtgataagccctattctccaacaccccct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tcattgagaaagaggggcatggaaatcttctgtgataagccctattctccaacaccccct 144

                            
Query: 421 gtcaaagtaacagccta 437
           | |||||||||||||||
Sbjct: 143 gccaaagtaacagccta 127


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 836
Length adjustment: 9
Effective length of query: 428
Effective length of database: 827
Effective search space:   353956
Effective search space used:   353956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)