Query= MSMg01no391_b05.b1 MSMg01no391_b05.b1 CHROMAT_FILE:
MSMg01no391_b05.b1 PHD_FILE: MSMg01no391_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:10 2005
(435 letters)
>mm_chr8_90772767_90773600
Length = 834
Score = 810 bits (419), Expect = 0.0
Identities = 431/435 (99%), Gaps = 1/435 (0%)
Strand = Plus / Plus
Query: 1 ggaattcattgaaaatgtaatttcatttctctttcagaaatatcctgtattgccatactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggaattcattgaaaatgtaatttcatttctctttcagaaatatcctgtattgccatactt 260
Query: 61 ggttttagtattgaaacagttcttattacagagggaccttaatgaagtatttacaggtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggttttagtattgaaacagttcttattacagagggaccttaatgaagtatttacaggtgg 320
Query: 121 aattggttcttatagtctctttttaatggcagtcagtttccttcaggtaagttgtgtggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattggttcttatagtctctttttaatggcagtcagtttccttcaggtaagttgtgtggg 380
Query: 181 tgtgctatatcagtgtgcactgggaaaaaagataaactacttgcagagacatttggggag 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgctatatcagtgtgcactgg-aaaaaagataaactacttgcagagacatttggggag 439
Query: 241 aaaatttaaatcaggaatttttacagtacttctcctttaaactgggtaccttttatatag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aaaatttaaatcaggaatttttacagtacttctcctttaaactgggtaccttttatatag 499
Query: 301 tttagcaaattagtatttaaacattcctaggagagagattgagactttactaggtatgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tttagcaaattagtatttaaacattcctaggagagagattgagactttactaggtatgtt 559
Query: 361 aacatgtaatgcctgccctggtttctgtaaatgtgaatgcaataacagccaaaacacagg 420
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aacatgtaatgtttggcctggtttctgtaaatgtgaatgcaataacagccaaaacacagg 619
Query: 421 gctgtctggagctca 435
|||||||||||||||
Sbjct: 620 gctgtctggagctca 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 834
Length adjustment: 9
Effective length of query: 426
Effective length of database: 825
Effective search space: 351450
Effective search space used: 351450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_b05.g1 MSMg01no391_b05.g1 CHROMAT_FILE:
MSMg01no391_b05.g1 PHD_FILE: MSMg01no391_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:10 2005
(308 letters)
>mm_chr8_90917422_90918129
Length = 708
Score = 580 bits (300), Expect = e-170
Identities = 306/308 (99%)
Strand = Plus / Minus
Query: 1 tttccactggcctgcagaaggagtgcttgtggctgcactgtggccaagtcattcgtgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tttccactggcctgcagaaggagtgcttgtggctgcactgtggccaagtcattcgtgttt 449
Query: 61 cggggattagtaacttcaatgtaagcaaatgcatcccatgggatacagtgtgcagcaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 cggggattagtaacttcaatgtaagcaaatgcatcccatgggatacagtgtgcagcaaag 389
Query: 121 aaccagctgcacacacagaaagtggcatgtgtggtactcaacagcactgggctgagagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aaccagctgcacacacagaaagtggcatgtgtggtactcaacagcactgggctgagagac 329
Query: 181 agagcagaaggcactgtgagccttttcctcatgcctgccagtcctctaactgagttatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 agagcagaaggcactgtgagccttttcctcatgcctgccagtcctctaactgagttatga 269
Query: 241 ctagatttataactaactctgtgcacttcctatactcattgtacggctcgagggagggaa 300
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ctagagtcataactaactctgtgcacttcctatactcattgtacggctcgagggagggaa 209
Query: 301 gatgtggt 308
||||||||
Sbjct: 208 gatgtggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 708
Length adjustment: 9
Effective length of query: 299
Effective length of database: 699
Effective search space: 209001
Effective search space used: 209001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
