Query= MSMg01no394_f10.b1 MSMg01no394_f10.b1 CHROMAT_FILE:
MSMg01no394_f10.b1 PHD_FILE: MSMg01no394_f10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:41 2005
(431 letters)
>mm_chr8_49680243_49681073
Length = 831
Score = 766 bits (396), Expect = 0.0
Identities = 399/400 (99%)
Strand = Plus / Minus
Query: 32 ttctcctttgagtactgacgagggtctatccaggactgtgcacttaacaacaacaggccg 91
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 ttctcctttgagtactgacgagggtctatccaggactgtgcacttaacaacaacaggcct 772
Query: 92 agtcttagttctatgggaaagcactcaaaagcacatacaagatgctaactctgatcccta 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 agtcttagttctatgggaaagcactcaaaagcacatacaagatgctaactctgatcccta 712
Query: 152 gctctgcacacacacacacacacacgtgcactcaaacacacacacacgtgcacacaggtg 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 gctctgcacacacacacacacacacgtgcactcaaacacacacacacgtgcacacaggtg 652
Query: 212 cacacacacaaatgcacacaagtgtacttgcacacaaaaatccttacataggaagaaaac 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 cacacacacaaatgcacacaagtgtacttgcacacaaaaatccttacataggaagaaaac 592
Query: 272 agagctcttatggaactgtgctacatatttaagatagtaacaaagagagctattcagaat 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 agagctcttatggaactgtgctacatatttaagatagtaacaaagagagctattcagaat 532
Query: 332 ggccaccatcttcaaaatcttgccatataccaaagaaactgagagaaaacagaagttgta 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ggccaccatcttcaaaatcttgccatataccaaagaaactgagagaaaacagaagttgta 472
Query: 392 tttatctgcccatattgcacatgcaaatgttccctgggaa 431
||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tttatctgcccatattgcacatgcaaatgttccctgggaa 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_f10.g1 MSMg01no394_f10.g1 CHROMAT_FILE:
MSMg01no394_f10.g1 PHD_FILE: MSMg01no394_f10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:41 2005
(422 letters)
>mm_chr8_49534994_49535822
Length = 829
Score = 723 bits (374), Expect = 0.0
Identities = 414/430 (96%), Gaps = 9/430 (2%)
Strand = Plus / Plus
Query: 1 aggcctgtgtgctaatgcttact-taacagatgtggaagccccaagcctcccc-tccccc 58
||||||| ||||||||||||| | ||||||||||||||||||||||| ||||| ||||||
Sbjct: 201 aggcctgcgtgctaatgctta-tgtaacagatgtggaagccccaagcttccccctccccc 259
Query: 59 ttcttcaagcatctcaagaat-ttttttcccctaaagcagagtattctagatgtccaacc 117
||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 260 ttcttcaagcatctcaagaatgtttttttccctaaagcagagtattctagatgtccaacc 319
Query: 118 tgtttctgtgtgtgggcccaaact-----tttttcttgttctttttatctaatggagagt 172
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 320 tgtttctgtgtgtgggcccaaactcgacttttttcttgttctttttatctaatggagagt 379
Query: 173 catctgggtgtggggaagggcaccgaaaccacaggggccatgatcttcgtcagtttgaaa 232
||||||||||||||||||||||| ||||||||||||||| || ||| |||||||||||||
Sbjct: 380 catctgggtgtggggaagggcactgaaaccacaggggccgtgctctgcgtcagtttgaaa 439
Query: 233 gcacactgaatgctgataaacgggcatggatatcaaaggtgtagagcaaatcaagactat 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gcacactgaatgctgataaacgggcatggatatcaaaggtgtagagcaaatcaagactat 499
Query: 293 tcctggagacatttgactttaaatatctgtctttagcatactcgaatgctgaacgagcaa 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcctggagacatttgactttaaatatctgtctttagcatactcgaatgctgaacgagcaa 559
Query: 353 cagagttccaataccagatcatcactaagaggacttgaaatggccacttcaaatattgtt 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cagagttccaataccagatcatcactaagaggacttgaaatggccacttcaaatattgtt 619
Query: 413 acagatacgt 422
||||||||||
Sbjct: 620 acagatacgt 629
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 829
Length adjustment: 9
Effective length of query: 413
Effective length of database: 820
Effective search space: 338660
Effective search space used: 338660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
