Query= MSMg01no398_g21.b1 MSMg01no398_g21.b1 CHROMAT_FILE:
MSMg01no398_g21.b1 PHD_FILE: MSMg01no398_g21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:09 2005
(525 letters)
>mm_chr8_60293669_60294591
Length = 923
Score = 953 bits (493), Expect = 0.0
Identities = 517/525 (98%), Gaps = 2/525 (0%)
Strand = Plus / Minus
Query: 1 caagatagaaagaaaatctctgtgggcatcatttcaggaaaggcaatagttggtctctgc 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 caagataggaagaaaatctctgtgggcatcatttcaggaaaggcaatagttggtctctgc 664
Query: 61 caacagccgttggatgccaccagaatggagcaattagagacgggatggatccgctggagc 120
|||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 663 caacagccattggatgccaccagaatggagcagttagagacgggatggatctgctggagc 604
Query: 121 gaaaacggtgcagtggctgtaaggcaaagctttgcagcaagaggagtccagtcaggatag 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 603 gaaaacggtgcagtggctgtaaggcaaagctttgcaacaagaggagtccagtcaggatag 544
Query: 181 ttaatgcacccttgatgcttactatttatagactgttcatagtttctacaagtagttcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ttaatgcacccttgatgcttactatttatagactgttcatagtttctacaagtagttcat 484
Query: 241 tgtttttctgatgtctcaaatcaattatgtcacagcttatggataattccaatccccaaa 300
||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 483 tgtttttctga-ggctcaaatcaattatgtcacagcttatggataattcc-atccccaaa 426
Query: 301 tctcagcatccccaaaataactgtgtcagctttacattgttgtaggccttacatgtatct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tctcagcatccccaaaataactgtgtcagctttacattgttgtaggccttacatgtatct 366
Query: 361 gtcctgtcatgattgagggtctagagagagaagcttccagtagttgaccctaatttgtac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gtcctgtcatgattgagggtctagagagagaagcttccagtagttgaccctaatttgtac 306
Query: 421 ctcccagtttatttcaatccactgggcaatctgtcctctctctccactcatgccatagga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ctcccagtttatttcaatccactgggcaatctgtcctctctctccactcatgccatagga 246
Query: 481 actatcttctgaaaagtcacttatgacttttgaacatactcccgt 525
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 actatcttctgaaaagtcacttatgacttttgaacatactcccgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 923
Length adjustment: 10
Effective length of query: 515
Effective length of database: 913
Effective search space: 470195
Effective search space used: 470195
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no398_g21.g1 MSMg01no398_g21.g1 CHROMAT_FILE:
MSMg01no398_g21.g1 PHD_FILE: MSMg01no398_g21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:09 2005
(427 letters)
>mm_chr8_60106099_60106925
Length = 827
Score = 795 bits (411), Expect = 0.0
Identities = 423/427 (99%)
Strand = Plus / Plus
Query: 1 acttcggttaaaacaagagcttatttccatgtgggatgtatgttattcaggacaatttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttcggttaaaacaagagcttatttccatgtgggatgtatgttattcaggacaatttgc 260
Query: 61 acgtgttacagggcccatgcaagctagcttcatgacaatggcgtttattacatgaactca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acgtgttacagggcccatgcaagctagcttcatgacaatggcgtttattacatgaactca 320
Query: 121 gacaagcgttacaaagcaaactggcggcaggtgacgggaaggagaaggttctggaagtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacaagcgttacaaagcaaactggcggcaggtgacgggaaggagaaggttctggaagtct 380
Query: 181 tttctgtttgtctgtttcagatgaaccctggctgtatttcttctggctccccaagaaagt 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 tttctgtttgtctgtttcagatgaaccctgactgtatttcttctggctccccaagaaagt 440
Query: 241 ctccttcttgcttcctctacgtaccatgatttacgggtttcttcgctcatagctgtggat 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttccttcaagcttcctctacgtaccatgatttacgggtttcttcgctcatagctgtggat 500
Query: 301 tctggcagttaagcagctgacactgatgtcgaacccacaggccaacagtgacctcgatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctggcagttaagcagctgacactgatgtcgaacccacaggccaacagtgacctcgatgg 560
Query: 361 tggacaacatgacatgttcacaaatgcaaggacaacgctcacatttctgcagtgtgaacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggacaacatgacatgttcacaaatgcaaggacaacgctcacatttctgcagtgtgaacc 620
Query: 421 ccgtaaa 427
|||||||
Sbjct: 621 ccgtaaa 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
