Query= MSMg01no399_e04.b1 MSMg01no399_e04.b1 CHROMAT_FILE:
MSMg01no399_e04.b1 PHD_FILE: MSMg01no399_e04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:14 2005
(400 letters)
>mm_chr8_11049035_11049834
Length = 800
Score = 710 bits (367), Expect = 0.0
Identities = 388/395 (98%), Gaps = 2/395 (0%)
Strand = Plus / Plus
Query: 7 gaattcactgggttgc-tcctatacccctttctgcttctcctgggagagggcccctacat 65
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcactgggg-gcatcctatacccctttctgcttctcctgggagagggcccctacat 265
Query: 66 ttgtgggagaggcatggactatgacactttccaccctcctggctcatagctccccatgtc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ttgtgggagaggcatggactatgacactttccaccctcctggctcatagctccccatgtc 325
Query: 126 cctcaagtgtgtggttgtcacctccacctgccattgggctctgctcctggcaattgctcc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 cctcaagtgtgtggttgtcacctccacctgccattgggctctgctcctggcaattgctcc 385
Query: 186 tctgtgtgggactctgtcctggaaggagccctgctgatcgtttggagagtggaccctagt 245
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tctgagtgggactctgtcctggaaggagccctgctgatcgtttggagagtggaccctagt 445
Query: 246 ttccccttaaaaacaagttttgaaatgtatgttgttgggcagggtggtacatgcctttag 305
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 446 ttccccttaaaaacaagttttgaaatgtgtgttgttgggcagggtggtacatgcctttag 505
Query: 306 ttccagcactcgggatgcagaggcaggaagatctctacagtgagttccaggaaagccaga 365
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 506 ttccagcactcgggatgcagaggcagggagatctctacagtgagttccaggaaagccaga 565
Query: 366 actgtattcggcgaccctgtctacaaacagaacaa 400
||||||||||| |||||||||||||||||||||||
Sbjct: 566 actgtattcggtgaccctgtctacaaacagaacaa 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space: 309281
Effective search space used: 309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no399_e04.g1 MSMg01no399_e04.g1 CHROMAT_FILE:
MSMg01no399_e04.g1 PHD_FILE: MSMg01no399_e04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:14 2005
(152 letters)
>mm_chr8_11217985_11218536
Length = 552
Score = 263 bits (136), Expect = 3e-75
Identities = 148/152 (97%)
Strand = Plus / Minus
Query: 1 caatgacttgctatgacagtctaggctgctggtggtatacctgtgtctgtgtgtcataga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 caatgacttgctatgacagtctaggctgctggtggtatacctgtgtctgtgtgtcatagg 293
Query: 61 tccatatatggcgtgtgaatcttcacactgcctcacagtcctcggaactgatgcttccgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 292 tccatatatggcgtgtgaatcttcacactgcctcacagtcctcggaactgatggttccgc 233
Query: 121 atctgcagagctgtgttctccctatatagtga 152
||| |||||||||||||||||||||| |||||
Sbjct: 232 atcggcagagctgtgttctccctatacagtga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 152
Length of database: 552
Length adjustment: 8
Effective length of query: 144
Effective length of database: 544
Effective search space: 78336
Effective search space used: 78336
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
