Query= MSMg01no401_p16.b1 MSMg01no401_p16.b1 CHROMAT_FILE:
MSMg01no401_p16.b1 PHD_FILE: MSMg01no401_p16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:44 2005
(193 letters)
>mm_chr8_116548776_116549368
Length = 593
Score = 356 bits (184), Expect = e-103
Identities = 190/192 (98%)
Strand = Plus / Plus
Query: 1 attctccttttgtttggggacaaatatgactgatagagagcagtgtttaatattgagaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctccttttgtttggggacaaatatgactgatagagagcagtgtttaatattgagaca 260
Query: 61 actctaaataagacaccagagcatctatatgtctagaaacttccccagatttttttaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actctaaataagacaccagagcatctatatgtctagaaacttccccagatttttttaaag 320
Query: 121 cacctatcttgcatgtatcaggctgtggtaagaaagtatccagtcatataattcaaatac 180
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caccaaacttgcatgtatcaggctgtggtaagaaagtatccagtcatataattcaaatac 380
Query: 181 cctatctccacc 192
||||||||||||
Sbjct: 381 cctatctccacc 392
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 593
Length adjustment: 8
Effective length of query: 185
Effective length of database: 585
Effective search space: 108225
Effective search space used: 108225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no401_p16.g1 MSMg01no401_p16.g1 CHROMAT_FILE:
MSMg01no401_p16.g1 PHD_FILE: MSMg01no401_p16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:44 2005
(236 letters)
>mm_chr8_116709306_116709940
Length = 635
Score = 402 bits (208), Expect = e-117
Identities = 229/236 (97%), Gaps = 1/236 (0%)
Strand = Plus / Minus
Query: 1 gatgatcaaagggntttttttgcattttattactgactttggttaacaattaaaaataga 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gatgatcaaaggg-tttttttgcattttattactgactttggttaacaattaaaaataga 331
Query: 61 aaaagaaaatcatatttttctgacagtattgggaaggaagccaagtctagagccctagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 aaaagaaaatcatatttttctgacagtattgggaaggaagccaagtctagagccctagcc 271
Query: 121 ctgatttatctttgcttctcaagtagtgtcccaatcctccttttcattgtctgtgtggac 180
|||||||||| |||||||||||||||||||||||||||||||||||||| | ||||| ||
Sbjct: 270 ctgatttatccttgcttctcaagtagtgtcccaatcctccttttcattgacagtgtgaac 211
Query: 181 ttttttattatgttttgaacaagaatggccccaatagatccacatatttgaatgtt 236
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 210 tttttaattatgttttgaacaagaatggccccaatagatccatatatttgaatgtt 155
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 635
Length adjustment: 9
Effective length of query: 227
Effective length of database: 626
Effective search space: 142102
Effective search space used: 142102
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
