XXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCCGCGGAATTCTGTGT
TGCTTACTCTATTGTCTGAGATTTCCACTTATCCTTACTATTATGGGACC
AATCCTTGAAGTTGCGTGTTAGGATCATGCATGAGGTTCATGAACGGGCA
CATCTCATTGGTTAGAATCTATGCATACATTTTTCTGAAAATTTACATTT
TATTAATGATAAATCCATCAATTTGTATGATTTTTACTTAATTTTTAAAA
GTACTTTTTGAGAAAGGTTCACACTCTCTTGCTTAGGTTTTACTAGAATT
TACTGGGTGCAACTGACTGACTAACCTACAAGCTTATAGCAAACTAGAAG
CTTCTGAATTCTGAGTGCTGATGTTAAAGGCATGTATTGCCACAACCATC
TAGTTTATTCTTTTGAAGTTTTTAAATCATTACCTTTTGAGGTTCCTACC
TGTTTTGATCATATTTTCAAACATCCTTCAACTCTTCCCAGATCCACACC
CTTCCCTGCCTCCCTACGAATCCTTTAAAAACATTTCTTTTTAATCCCTA
AAGACTTTGTTGTGCTGTCCAAATATCCTTGAATGCAAAGTTTGCAGCTT
GTCCTCTCCACCAAGGGGGCCCTTCTTAAAGAAATGGGGTCTCCCCCCCC
CCCCAAATTAAAAATTGCCATAAATCCCCAGTTATCATTGGGGCTCCTGG
TCCAATCCCCCCCCTATGGTTGGAATTTTTCTTGGTTGGCTATAAAAAAA
TATTCCCCCCCCCCGTTTACACAAGAGAATT

GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXAGAATGGTATGGTAATTAATTTATGAGAATTTAAATT
CTGGGTGTGTACAGTAAGATTTAGAAAACAGAAATAGTTCAGTAGTTAAG
AACACTGTCTATCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGTTGA
AGGGGTCTGCAACCCTATAGGTGGAACAACAATATGAACTAACCAGTACC
CCAGAGCTTGTGTCTCTAGCTGCATATGTAGCAGAAGATGGCCTAGTCGG
CCAAAATTGGGAAGAGAGGCCCCTTGGTCTTCCAAACTTTATATGCCCCA
GTACAGGGGAACACCAGAGCCAAGAAGTGGGAGTGGGAGTGGGTGGNTAG
NNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTNNTNTNNTTTTNNNTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTNTTTTTTTTTTTTTTTTTTTNNTTTTTTTTTTTTNTTTTTTTT
TTTTTTTTTTTNTTTNNTCCTTTTTTTTTTTTTTTTTTTTCNNNNTCTTT
TTTTTTTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTT
TTTTTCTTTTTTCTCCTTCTTCTTTTCTCTTTTCTTTTTTCTTTTTTTTT
CTCTCTCTTTCTTCTTTTCTTTTTTN

Query= MSMg01no404_c21.b1 MSMg01no404_c21.b1 CHROMAT_FILE:
MSMg01no404_c21.b1 PHD_FILE: MSMg01no404_c21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:45 2005
         (484 letters)



>mm_chr8_39313076_39313959
          Length = 884

 Score =  816 bits (422), Expect = 0.0
 Identities = 428/430 (99%)
 Strand = Plus / Minus

                                                                       
Query: 15  ggaattctgtgttgcttactctattgtctgagatttccacttatccttactattatggga 74
           |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ggaattctgtgttgcagactctattgtctgagatttccacttatccttactattatggga 371

                                                                       
Query: 75  ccaatccttgaagttgcgtgttaggatcatgcatgaggttcatgaacgggcacatctcat 134
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ccaatccttgaagttgcgtgttaggatcatgcatgaggttcatgaacgggcacatctcat 311

                                                                       
Query: 135 tggttagaatctatgcatacatttttctgaaaatttacattttattaatgataaatccat 194
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tggttagaatctatgcatacatttttctgaaaatttacattttattaatgataaatccat 251

                                                                       
Query: 195 caatttgtatgatttttacttaatttttaaaagtactttttgagaaaggttcacactctc 254
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 caatttgtatgatttttacttaatttttaaaagtactttttgagaaaggttcacactctc 191

                                                                       
Query: 255 ttgcttaggttttactagaatttactgggtgcaactgactgactaacctacaagcttata 314
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttgcttaggttttactagaatttactgggtgcaactgactgactaacctacaagcttata 131

                                                                       
Query: 315 gcaaactagaagcttctgaattctgagtgctgatgttaaaggcatgtattgccacaacca 374
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gcaaactagaagcttctgaattctgagtgctgatgttaaaggcatgtattgccacaacca 71

                                                                       
Query: 375 tctagtttattcttttgaagtttttaaatcattaccttttgaggttcctacctgttttga 434
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  tctagtttattcttttgaagtttttaaatcattaccttttgaggttcctacctgttttga 11

                     
Query: 435 tcatattttc 444
           ||||||||||
Sbjct: 10  tcatattttc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space:   414276
Effective search space used:   414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)