NTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTGGGTNCTTCGAGTGGGGGGGGGGGGGGAAGGAAAGCAAAGAGT
TGTTACATGAATTTCATAATTTAGAGATAAATAATGAACACCAAACTTGG
AGGAAAATACCCTAGTGTTCATTTTATTTAATATTCTCCATTGGTGGAAA
TAAATTAAAAATGAACAAGGCTTGTTTATGCCTGCCTCACATTGCCCTCT
ACTTTTTGAATAGCAACCGCATATTAATTTGCCAGATCCCATAAATTATA
ATTAGCCCGGAGGATTAACAACTTTAATCTTTGAATTTAAAACCAACCTG
CCTGCTTCTCTCTTCCCTATACCCTAAAGTAAAAAAGGGCCATAAAACCT
ATCACTGCTACTTGATCCATTAAACTCCGGAGACATTCTTATTTCAGCTC
AGCTACTGGAGGCAGTCTTTGTCAAATCCTTTTTTAAAGTTACAGTAGCT
TGATAGGCGCTGGGAATCAGGGAGATGAGGATCTGTGTCAACATCCAGTA
CAGCGCACAATGCCTGTTTACCAGTACACCGGGAGAATAGGGTCCCGGTA
CTACATAGAGATTAATAGTGGTCCTGTACCCGCCCCCCCCCCATTGGATT
CCTGTTAGTCTATTTTTTTTTTTTTATCATAAGGACGTATCTAATCTGAC
TTACCCCATTAAATTTCTCCTTCTTAAAGACCCATTCAAATTTTTCAAAC
GCAGCCCTTGCTCAAAACACTTTAAACAAT

CCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAAGGAGGAAAATGAGAGATTGAGTATA
AAGACTATGGGCTTCGGGGTCAGACTAGAGTTTCAATACTTGGAAAGGGC
TGGTTTGCTCATTGGGCAGGTCTTCGTGAGCATACGAAGTGTGTTAATTA
GTCTTCTCATAGCTCCCACAGAATGTTCAACAGGAACACATTAAGGGAAA
ATGCCTTTATCCTTGGCTCACAGTTTCCGACAGAATTTTTTAATCATGGT
CAGGATGGCATAACTTCATCTGTGGTAGTGTGTGGTGGTTTGAATATGCT
TGGTCCATAGAGAGCAGCACTGTTAGGGGGCATGACCTTGTTGGAGGAAG
TGTGTCACTGCGTGGGTAGGCTTTGGAGGTCTCCTCCTAGTTGCCTGCAG
AAAACAGTCTGTCCTGGTTGCCTTTGAATCAAGATGGAGAACTCTCAGCT
CCTTCTCCAGCACCATGTCTGCCTGCATGCTGCCATGATACCTGCTATGA
TGATAGTGGACTGAACCCCTGAAACTGTAAGCCAGTTCCAATTGCCCCCA
TATCAATTCACTTTTGTCAGCCAGACCCCATGTCTTCTTTTCACCTCTGG
ATACGTTTCATACTTTGGTATATAGAAGCTACCCTCTTCACCAAACATTC
CATGAACTTGGCTATGTCCCATTTTTCTCTTAATCTCTTTAGACATGGTC
CAG

Query= MSMg01no409_a19.b1 MSMg01no409_a19.b1 CHROMAT_FILE:
MSMg01no409_a19.b1 PHD_FILE: MSMg01no409_a19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:15 2005
         (254 letters)



>mm_chr8_117773189_117773842
          Length = 654

 Score =  460 bits (238), Expect = e-134
 Identities = 238/238 (100%)
 Strand = Plus / Minus

                                                                       
Query: 16  aaggaaagcaaagagttgttacatgaatttcataatttagagataaataatgaacaccaa 75
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 aaggaaagcaaagagttgttacatgaatttcataatttagagataaataatgaacaccaa 394

                                                                       
Query: 76  acttggaggaaaataccctagtgttcattttatttaatattctccattggtggaaataaa 135
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 acttggaggaaaataccctagtgttcattttatttaatattctccattggtggaaataaa 334

                                                                       
Query: 136 ttaaaaatgaacaaggcttgtttatgcctgcctcacattgccctctactttttgaatagc 195
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ttaaaaatgaacaaggcttgtttatgcctgcctcacattgccctctactttttgaatagc 274

                                                                     
Query: 196 aaccgcatattaatttgccagatcccataaattataattagcccggaggattaacaac 253
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aaccgcatattaatttgccagatcccataaattataattagcccggaggattaacaac 216


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 254
Length of database: 654
Length adjustment: 9
Effective length of query: 245
Effective length of database: 645
Effective search space:   158025
Effective search space used:   158025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no409_a19.g1 MSMg01no409_a19.g1 CHROMAT_FILE:
MSMg01no409_a19.g1 PHD_FILE: MSMg01no409_a19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:16 2005
         (487 letters)



>mm_chr8_117577319_117578205
          Length = 887

 Score =  888 bits (459), Expect = 0.0
 Identities = 480/487 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaggaggaaaatgagagattgagtataaagactatgggcttcggggtcagactagagttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggaggaaaatgagagattgagtataaagactatgggcttcggggtcagactagagttt 260

                                                                       
Query: 61  caatacttggaaagggctggtttgctcattgggcaggtcttcgtgagcatacgaagtgtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 caatacttggaaagggctggtttgctcattgggcaggtcttcgtgagcatacggagtgtg 320

                                                                       
Query: 121 ttaattagtcttctcatagctcccacagaatgttcaacaggaacacattaagggaaaatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaattagtcttctcatagctcccacagaatgttcaacaggaacacattaagggaaaatg 380

                                                                       
Query: 181 cctttatccttggctcacagtttccgacagaattttttaatcatggtcaggatggcataa 240
           ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 381 cctttatccttggctcacagtttccaacagaatttttaaatcatggtcaggatggcataa 440

                                                                       
Query: 241 cttcatctgtggtagtgtgtggtggtttgaatatgcttggtccatagagagcagcactgt 300
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 cttcatctgtggtagtgtgtggtggtttgaatatgcttggtccatagagatcagcactgt 500

                                                                       
Query: 301 tagggggcatgaccttgttggaggaagtgtgtcactgcgtgggtaggctttggaggtctc 360
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 tagggggcatgaccttgttggaggaagtgtgtcactgtgtgggtaggctttggaggtctc 560

                                                                       
Query: 361 ctcctagttgcctgcagaaaacagtctgtcctggttgcctttgaatcaagatggagaact 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 561 ctcctagttgcctgcagaaaacagtctgtcctggttgcctttgaatcaagatgcagaact 620

                                                                       
Query: 421 ctcagctccttctccagcaccatgtctgcctgcatgctgccatgatacctgctatgatga 480
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 621 ctcagctccttctccagcaccatgtctgcctgcatgctgccatgatacttgctatgatga 680

                  
Query: 481 tagtgga 487
           |||||||
Sbjct: 681 tagtgga 687


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space:   418329
Effective search space used:   418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)