Query= MSMg01no409_j21.b1 MSMg01no409_j21.b1 CHROMAT_FILE:
MSMg01no409_j21.b1 PHD_FILE: MSMg01no409_j21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:02 2005
(428 letters)
>mm_chr8_110351079_110351905
Length = 827
Score = 774 bits (400), Expect = 0.0
Identities = 418/426 (98%), Gaps = 5/426 (1%)
Strand = Plus / Minus
Query: 5 gaattccagaaagaattcgggagagggcactggtaactccgcccgagttatcttccctag 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gaattccagaaagaataagggagagggcactggtaactccgcccgagttatcttccctag 390
Query: 65 gaacactcatcccgggtggtgaaaacatgcagacgagtgcttttctccattttttttt-- 122
||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 389 gaacactcatcccgggtggtgaaaacatgcagacgcgtgcttttctcca---ttttttaa 333
Query: 123 aaagagatgcttgatatggggcccaaagattcggggactacaaggaacttaagtccaaag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 aaagagatgcttgatatggggcccaaagattcggggactacaaggaacttaagtccaaag 273
Query: 183 gcagatcccagtttacaaagaggccctgtggcagacacagaatttgatcacataaactaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gcagatcccagtttacaaagaggccctgtggcagacacagaatttgatcacataaactaa 213
Query: 243 gtttaaatcaggggttctcacccttcctaattctttgactgtttaatacagttccttgta 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gtttaaatcaggggttctcacccttcctaattctttgactgtttaatacagttccttgta 153
Query: 303 tggtggtgacggccccccaacccaaaaaattactttcgttgctatgttataactgtaatt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 tggtggtgacggccccccaacccaaaaaattactttcgttgctatgttataactgtaatt 93
Query: 363 ttgctactgttatgaatcctaaggtaaatatccatgttttctgatggtcttaggtagccc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 ttgctactgttatgaatcctaaggtaaatatccatgttttctgatggtcttaggtagccc 33
Query: 423 ctgtga 428
||||||
Sbjct: 32 ctgtga 27
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 827
Length adjustment: 9
Effective length of query: 419
Effective length of database: 818
Effective search space: 342742
Effective search space used: 342742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no409_j21.g1 MSMg01no409_j21.g1 CHROMAT_FILE:
MSMg01no409_j21.g1 PHD_FILE: MSMg01no409_j21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:03 2005
(377 letters)
>mm_chr8_110176088_110176865
Length = 778
Score = 665 bits (344), Expect = 0.0
Identities = 372/387 (96%), Gaps = 10/387 (2%)
Strand = Plus / Plus
Query: 1 attccaatgctttagtgtgggagggaatgcaccagggggctcggcccacaggaaacatga 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 attccaacgctttagtgtgggagggaatgcaccagggggctcggcccacaggaaacatga 251
Query: 61 ggaaaacatcttattttaagatatgcatttaatacgtttctcagatttggaaagaaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ggaaaacatcttattttaagatatgcatttaatacgtttctcagatttggaaagaaaagt 311
Query: 121 taacgtctgggaatgccttttgattcacaagccaggaggacccgcgttcagcaccc---- 176
|||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 312 taacgtctgggaatgccttttgattcacaagccaggaggacccgtgttcagccccctgcc 371
Query: 177 -----cacccccaccc-ccgcacaccccacccccatctttagattagaaatgatttattt 230
||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cctgacaccccccccctccgcacaccccacccccatctttagattagaaatgatttattt 431
Query: 231 acaggggggaaagaacagcactttgatctacaatacaaatgttaaacatttatgaggttt 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 acaggggggaaagaacagcactttgatctacaatacaaatgttaaacatttatgaggttt 491
Query: 291 aagaatatttatgaatgtgtaaaagttattaaagtcaatgtgttttgggttaccttgcga 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aagaatatttatgaatgtgtaaaagttattaaagtcaatgtgttttgggttaccttgcga 551
Query: 351 tcaggtagagtaaatacnaagctagca 377
||||||||||||||||| |||||||||
Sbjct: 552 tcaggtagagtaaatacaaagctagca 578
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 778
Length adjustment: 9
Effective length of query: 368
Effective length of database: 769
Effective search space: 282992
Effective search space used: 282992
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
