Query= MSMg01no410_k08.b1 MSMg01no410_k08.b1 CHROMAT_FILE:
MSMg01no410_k08.b1 PHD_FILE: MSMg01no410_k08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:27 2005
(194 letters)
>mm_chr8_35200310_35200903
Length = 594
Score = 333 bits (172), Expect = 5e-96
Identities = 186/196 (94%), Gaps = 10/196 (5%)
Strand = Plus / Plus
Query: 1 agggaaaacatgtaaggattttagattcagcaggacaccatggaaagcagtctagagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agggaaaacatgtaaggattttagattcagcaggacaccatggaaagcagtctagagaag 260
Query: 61 tgggaaaccagccaagcttttccaaatgagaaaatccttttaatcttcagcaagtcccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggaaaccagccaagcttttccaaatgagaaaatccttttaatcttcagcaagtcccca 320
Query: 121 tggaattttta-----ggcgaacaacagtgagaaggaagcaactaggacaccccagaggc 175
||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggaa-----acaggaggcgaacaacagtgagaaggaagcaactaggacaccccagaggc 375
Query: 176 tcgccaacagctcagc 191
||||||||||||||||
Sbjct: 376 tcgccaacagctcagc 391
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no410_k08.g1 MSMg01no410_k08.g1 CHROMAT_FILE:
MSMg01no410_k08.g1 PHD_FILE: MSMg01no410_k08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:27 2005
(244 letters)
>mm_chr8_35388521_35389164
Length = 644
Score = 472 bits (244), Expect = e-138
Identities = 244/244 (100%)
Strand = Plus / Minus
Query: 1 actccaaatattctctttttgagctaattaccagggattaggctggaaatcccctctgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 actccaaatattctctttttgagctaattaccagggattaggctggaaatcccctctgaa 385
Query: 61 accatatctgctttgcagataaccacctggatgtggatataaatgtggaggtcacaacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 accatatctgctttgcagataaccacctggatgtggatataaatgtggaggtcacaacca 325
Query: 121 cacagctccacgagaagcggcttagttcaaactccttgacttgggccgatttcaaagtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cacagctccacgagaagcggcttagttcaaactccttgacttgggccgatttcaaagtat 265
Query: 181 tcactcttaacaagcaacgacaacgcagagattccctcttgaaagagccctgcatgtgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcactcttaacaagcaacgacaacgcagagattccctcttgaaagagccctgcatgtgtt 205
Query: 241 caga 244
||||
Sbjct: 204 caga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
