Query= MSMg01no412_e20.b1 MSMg01no412_e20.b1 CHROMAT_FILE:
MSMg01no412_e20.b1 PHD_FILE: MSMg01no412_e20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:37 2005
(410 letters)
>mm_chr8_94145437_94146247
Length = 811
Score = 741 bits (383), Expect = 0.0
Identities = 401/407 (98%), Gaps = 1/407 (0%)
Strand = Plus / Minus
Query: 5 gaattctttttat-tgcccataaaaaggccctaaacacaaatgtttttttttttttctgt 63
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gaattctttttatgggaacataaaaaggccctaaacacaaatgtttttttttttttctgt 552
Query: 64 tgtcatatttgtgcaggggatgggggagagccatgttcctggatgtctctcttacactgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tgtcatatttgtgcaggggatgggggagagccatgttcctggatgtctctcttacactgt 492
Query: 124 atcctctgtccacctacaacaggcaccctgcaggaggatggcagcatcttactcttctct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 atcctctgtccacctacaacaggcaccctgcaggaggatggcagcatcttactcttctct 432
Query: 184 cactgtggcctgcctgctttcttcatccttggaggttgtgggagccggctcatcttcagt 243
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 431 cactgtggcctgcctgctttcttcatccttggaggtcatgggagccggctcatcttcagt 372
Query: 244 gtattactgagcctctgtggtgcctggtcctgtgtctgggctctattctgccgaggatgg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gtattactgagcctctgtggtgcctggtcctgtgtctgggctctattctgccgaggatgg 312
Query: 304 agagcgcatggacagaagagctgccttttacatccattcgcaggttctaagtcagccaca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 agagcgcatggacagaagagctgccttttacatccattcgcaggttctaagtcagccaca 252
Query: 364 ccacaggttcctgtgcagggaagcctctgtttacagggaatgagacc 410
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ccacaggttcctgtgcagggaagcctctgtttacagggaatgagacc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 811
Length adjustment: 9
Effective length of query: 401
Effective length of database: 802
Effective search space: 321602
Effective search space used: 321602
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no412_e20.g1 MSMg01no412_e20.g1 CHROMAT_FILE:
MSMg01no412_e20.g1 PHD_FILE: MSMg01no412_e20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:37 2005
(436 letters)
>mm_chr8_93974206_93975041
Length = 836
Score = 820 bits (424), Expect = 0.0
Identities = 433/436 (99%)
Strand = Plus / Plus
Query: 1 tttcctagacaaatacaagatataggcattcaaaaaactacaactcaaaaatctctaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcctagacaaatacaagatataggcattcaaaaaactacaactcaaaaatctctaata 260
Query: 61 aagaaattgtgttacataaataagtaacttaaatttcttcagtaatttcagagacaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagaaattgtgttacataaataagtaacttaaatttcttcagtaatttcagagacaaagt 320
Query: 121 attatcttgtataaattaataattctcataaaaattcagagacaacgtattaaaaaccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attatcttgtataaattaataattctcataaaaattcagagacaacgtattaaaaaccag 380
Query: 181 tattgctggctataataatggatatccactatggaggctctgagaggcacagattgtgag 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 tattgctggctataataatggacatccactatggaggctctgagaggcacagattgtgag 440
Query: 241 tggagaaactgaggcctggtgtccttgtggtgtgttattaacttaactagactggactgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggagaaactgaggcctggtgtccttgtggtgtgttattaacttaactagactggactgt 500
Query: 301 ggatgctgtaaattacacaggccccagagtaagcaggaaccatgtagtggatacacaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggatgctgtaaattacacaggccccagagtaagcaggaaccatgtagtggatacacaaag 560
Query: 361 ggtagggacagaggagtcaaagcgcatcactgtcgacgagtgactgtgtcgtaaaggcca 420
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 561 ggtagggacagaggagtcaaagcgcatcactgtcggcgagtgactgtgtcgtagaggcca 620
Query: 421 gaacaagaggaggaaa 436
||||||||||||||||
Sbjct: 621 gaacaagaggaggaaa 636
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
