NNNAAGAACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCCAACTCTGCTGCTTGCTTCAAAACACTTGTCTTCCTG
AGTACTTTCCTACCAACGTAGTTGAAGTAACCATGAGAAATTCTCTTCAG
AACGCTCCCTCACGTCTACTGCCCTTCTCTTTGTGTCTTTTCAAATAAAC
CTGTGCTTCCCCAGAGACTTATTATATTATTTGCAAAGGGATCTCATATT
TAAAAGCCAAGACTTTTTGCACAGGTTCACAGGACTTATTTTGCTCCAAA
CTGACACTTTTCCACACACATGTTATGAAGTCAAGACATTTAAGCATTAT
TTTATAGATTTCTTTAGGGATAATATTGACTTTTGTGAGCTTTATCCTTT
GCATGTTTAGAAATTTCAGATAAGTGAAAGGAACCAGTATTATGTTTGAT
GTTATGCAGACTGTCATAAAGTGGAAGTTACTTGAAACAAAAGGACTGTG
ATCCATTTTCTTTTACCAGTGAACATTGTACCAGGTCAGTTTCATTGGTT
CACTGGAAGGCTGCAGTATATAATTTTCCTGTCTTGGTCCCCTTCCATAG
GCAAGTTTCTACTTCGTAATATGGCCCAAAGCCTGCGGTTTTAAATGATA
TTTTATTTTTAAAGATTTATATAAGATAAAGATAATAATGTATTTTCAAG
TTAATTAAAATGTTCAACGCTTTTTTTGTTCACAT

NNNCCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTCTTTATGTCCTCTACCAT
CATCATGAGATATGCTTTTAAATCCAGGTCTACCTTTTCAGGTGTGTTAG
GGTGTCCTGGATTGGGCGAAGTGGGCGTTCTGGGTTCTGATGATGGTGAG
TGGTCCTGGCTTCTGTTAGTAGGATTCTTACGTTTACCTTTCACCATCTG
GCAATCTCTGGAGTTAGTTGTTATAGTTGTCTTTGTTAAAAGATTGTTCC
TCTGTTGATTTTGTTACCCTCTATCATCTTTTTTGGGAGACAAGCTCTCT
TCTCTGAGTTTCAGTGGTCAGAGCAGTCTCTGTAGGCAAGCTCTCCTCTC
TCAGGGAAGGTGTACAGTTATCTGGTGTTTGGACCTCCTCCTGGCTGAAG
GTGAAGGCCCAAAACAGGATCTTTCCCAGAAGCTGTGTTGCTTTGGCCAG
GAAGGTGGCCAGTTGTCTGGAGTCGAAGATGTCGCAGCCTCAGAAGCTCT
GTGGCTCTTGCCGGGAAGGTGGCTGGTTGTCTGGAGCTGANGATGGTGCC
GCCCCAGAATCTCTGCGACTCTCTCGCCCGTTCCAGAAACAGTTGGCACT
CTGTATTCCCACGGTCTCCTTGTTTTCTGCCCTCCGGGAGTCCTGGAGCC
TATAAGTTTCCGCCCGCGCCCGTGCCCTTAACTTTCCTGCTTGCATACCT
CG

Query= MSMg01no414_f24.b1 MSMg01no414_f24.b1 CHROMAT_FILE:
MSMg01no414_f24.b1 PHD_FILE: MSMg01no414_f24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:24 2005
         (651 letters)



>mm_chr8_104541866_104542916
          Length = 1051

 Score = 1212 bits (627), Expect = 0.0
 Identities = 645/651 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcttgcttcaaaacacttgtcttcctgagtactttcctaccaacgtagttgaagtaacca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcttgcttcaaaacacttgtcttcctgagtactttcctaccaacgtagttgaagtaacca 260

                                                                       
Query: 61  tgagaaattctcttcagaacgctccctcacgtctactgcccttctctttgtgtcttttca 120
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 tgagaaattctcttcagaacgctccctcacctctactgcccttctctttgtgtcttttca 320

                                                                       
Query: 121 aataaacctgtgcttccccagagacttattatattatttgcaaagggatctcatatttaa 180
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 aataaacctgtgcttccccagagacttattatattatttgcaaaaggatctcatatttaa 380

                                                                       
Query: 181 aagccaagactttttgcacaggttcacaggacttattttgctccaaactgacacttttcc 240
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagccaagactttttgcacaggtccacaggacttattttgctccaaactgacacttttcc 440

                                                                       
Query: 241 acacacatgttatgaagtcaagacatttaagcattattttatagatttctttagggataa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acacacatgttatgaagtcaagacatttaagcattattttatagatttctttagggataa 500

                                                                       
Query: 301 tattgacttttgtgagctttatcctttgcatgtttagaaatttcagataagtgaaaggaa 360
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 501 tattgacttttgtgagctttatgctttgcatgtttagaaatttcagataagtgaaaggaa 560

                                                                       
Query: 361 ccagtattatgtttgatgttatgcagactgtcataaagtggaagttacttgaaacaaaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccagtattatgtttgatgttatgcagactgtcataaagtggaagttacttgaaacaaaag 620

                                                                       
Query: 421 gactgtgatccattttcttttaccagtgaacattgtaccaggtcagtttcattggttcac 480
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gactgtgattcattttcttttaccagtgaacattgtaccaggtcagtttcattggttcac 680

                                                                       
Query: 481 tggaaggctgcagtatataattttcctgtcttggtccccttccataggcaagtttctact 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggaaggctgcagtatataattttcctgtcttggtccccttccataggcaagtttctact 740

                                                                       
Query: 541 tcgtaatatggcccaaagcctgcggttttaaatgatattttatttttaaagatttatata 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcgtaatatggcccaaagcctgcggttttaaatgatattttatttttaaagatttatata 800

                                                              
Query: 601 agataaagataataatgtattttcaagttaattaaaatgttcaacgctttt 651
           ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 801 agataaagataataatgtattttcaagttaattaaaatggtcaacgctttt 851


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space:   667281
Effective search space used:   667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)