XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAG
GACAGTCACGGGCTATACAGAGAAATCCTGGTCTTGAAAAACCAAAAAAA
AAAAAAAAAAGACTCTCAAAAATTGTGTGGCATCAGGCTGCATACATAGT
AAGGGCCTGGAAGTCAAAGGATCACATGTTTAACAGGAAACTGAGATAGC
AAACAGAATGTAGGACAAAGCTATGAACTATCAAAGCCTGCCTCAAGTGA
TGTACTTCTTCCAGCAAGGCTGCACGAACTCCCCAAAGTGATACCAACTG
GGGACTAAGTGTTCAAATATCTGAACCTATTGGGGGAGGTTCTTATTCAG
ACCTCAGCATCCCATGTATAAAAGCATAGTGGCACTTTTTGGATTTCTTT
ACAAAAGACTTTCCTCCAAATAGCAAATCAATCAATCAATCAAACAAACA
AACAAACAAAAAAACCCTCCAGAGAATATTAAGGCCCTAGAGTTGTATTA
CATGCATCTCACAATAATTACAGTCTTTAATTTTGTAAAATAATTACTAA
TAACATAGAAATTACCCAAAAAAATCTTTGGTTGGAGTTAAATTTATAAA
GCGAACTTAATCTCATGATCTCAAGCTTGTCCATTTGGGGTGATCAGTGA
TAACCAGGGGTTGCATATGTGAGGAAGAAAGATTTGATTCTTTCACTCTA
GAGACAGTCTATTTTCATGCTGAAGTGG

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCACCTTCTCTTAAGGGATGTTTAG
GCGTTGTGTACAGCNNNNNNTTNNNNNCGTTNNGNNANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTNNAAAAAA
ATATATTTTTTTTTTTTTTTTNNNNNNNNNCCAGTCGTTGTAGNNNNTNC
CCGTNTGACCTTTTTTTTAANNTNNAAAAATTTCCCTGGAAGGGAAGGGG
GGCCAAAATTATCCCTCCCTTTTCAAGGGGGAAAGGAAAAAATTCCCCCC
CGGGTGCCCGGGGAAAGGAATGGGGCGCTTTTCCCCCCCCGCCCCGTTCC
CCCTAAAAATAAGTTGGGGGGGAGGGGGGGGGGGCCCCCCCCCCCCCCNN
NTTANANNATCCCCCCCCCCTTTTTGGGGGGGGGAGAGGGGAAAAGGGCC
CCCCCCCCCCCCGTTTGGGGGGGCCCCCCCCCCANCCCCCCCCCCCCGGG
GGGGGGGTTTGGGGGGGGGGGGGGGCCCTCTTATAAAGGGGGGGGGGGGG
GGGGGGCCGTGGGGGGGGGGGGGGGGGCCCCCGGGGGGGGGGGGGGGGGT
TTTCTCCCTCCCCCCCCCCGGGGCGGGGGGGGGGGGGGGGTTCTCGCCCT
CCCCGCGGCGGCCCCNCGCGCGGGGGCCCACAAAAAATAGGGGGGGGGAC
GGGCGGGCCTTCTTTGCNCTTG

Query= MSMg01no416_k01.b1 MSMg01no416_k01.b1 CHROMAT_FILE:
MSMg01no416_k01.b1 PHD_FILE: MSMg01no416_k01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:18 2005
         (587 letters)



>mm_chr8_76747812_76748798
          Length = 987

 Score = 1075 bits (556), Expect = 0.0
 Identities = 582/594 (97%), Gaps = 8/594 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gctatacagagaaatcctggtcttgaaaaaccaaaaaaaaaaaaaaaaa---gactctca 57
           ||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||||
Sbjct: 195 gctatacagagaaatcctg-tcttgaaaaaccaaaaaaaaaaaaaaaaaaaagactctca 253

                                                                       
Query: 58  aaaattgtgtggcatcaggctgcatacatagtaagggcctggaagtcaaaggatcacatg 117
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 254 aaaattgtgtggcatcaggctgcatgcatagtaagggcctggaagtcaaaggatcacatg 313

                                                                       
Query: 118 tttaacaggaaactgagatagcaaacagaatgtaggacaaagctatgaactatcaaagcc 177
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 314 tttaacaggaaactgagatagcaaacagaatgtaggacaaagctatgaactctcaaagcc 373

                                                                       
Query: 178 tgcctcaagtgatgtacttcttccagcaaggctgcacgaactccccaaagtgataccaac 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tgcctcaagtgatgtacttcttccagcaaggctgcacgaactccccaaagtgataccaac 433

                                                                       
Query: 238 tggggactaagtgttcaaatatctgaacctattgggggaggttcttattcagacctcagc 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tggggactaagtgttcaaatatctgaacctattgggggaggttcttattcagacctcagc 493

                                                                       
Query: 298 atcccatgtataaaagcatagtggcactttttggatttctttacaaaagactttcctcca 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 atcccatgtataaaagcatagtggcactttttggatttctttacaaaagactttcctcca 553

                                                                       
Query: 358 aatagcaaatcaatcaatcaatcaaacaaacaaacaaacaaa----aaaaccctccagag 413
           ||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||
Sbjct: 554 aatagcaaatcaatcaatcaatcaaacaaacaaacaaacaaacaaaaaaaccctccagag 613

                                                                       
Query: 414 aatattaaggccctagagttgtattacatgcatctcacaataattacagtctttaatttt 473
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 614 aatattaaggccctagagttgtattacatgcatctaacaataattacagtctttaatttt 673

                                                                       
Query: 474 gtaaaataattactaataacatagaaattacccaaaaaaatctttggttggagttaaatt 533
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 674 gtaaaataattactaataacatagaaattacccaaaaaaatctttggtttgagttaaatt 733

                                                                 
Query: 534 tataaagcgaacttaatctcatgatctcaagcttgtccatttggggtgatcagt 587
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 tataaagcgaacttaatctcatgatctcaagcttgtccatttggggtgatcagt 787


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space:   563729
Effective search space used:   563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)