Query= MSMg01no419_l21.b1 MSMg01no419_l21.b1 CHROMAT_FILE:
MSMg01no419_l21.b1 PHD_FILE: MSMg01no419_l21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:22 2005
(377 letters)
>mm_chr8_53633352_53634128
Length = 777
Score = 677 bits (350), Expect = 0.0
Identities = 370/377 (98%)
Strand = Plus / Minus
Query: 1 aagtagagaagagctattctaggtctataatccttttatttaaaagagtgttgagaactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 aagtagagaagagctattctaggtctataatccttttatttaaaagagtgttgagaactt 518
Query: 61 agtatgaagtctattaaaatggaatgaaaggaattgctttagtaaagtgaggaatagagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 agtatgaagtctattaaaatggaatgaaaggaattgctttagtaaagtgaggaatagagt 458
Query: 121 atggatatttccattaaataggcatgaagactggaaaatcagtttaatcagactcagcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 atggatatttccattaaataggcatgaagactggaaaatcagtttaatcagactcagcaa 398
Query: 181 atatgaaaggaggcatttggattgacttgggaaagattttaagaccaacaaatatttttg 240
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 397 atatgacaggaggcatttggattgacttgggaaagattttaaggccaacaaatatttttg 338
Query: 241 gagaagaaaagatttatttctatttaatatctggaaaaaatctttaacttggattattac 300
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 337 gagaagaaaagatttaagtctatttaatatctggaaaaaatcgttaacttggattattac 278
Query: 301 ctaataatttatctattatctacagagagatattatttttaatatatcctttanagtcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 277 ctaataatttatctattatctacagagagatattatttttaatatatcctttaaagtcaa 218
Query: 361 tgcactttactgagata 377
|||| ||||||||||||
Sbjct: 217 tgcattttactgagata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space: 282624
Effective search space used: 282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no419_l21.g1 MSMg01no419_l21.g1 CHROMAT_FILE:
MSMg01no419_l21.g1 PHD_FILE: MSMg01no419_l21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:22 2005
(431 letters)
>mm_chr8_53491638_53492468
Length = 831
Score = 781 bits (404), Expect = 0.0
Identities = 428/441 (97%), Gaps = 10/441 (2%)
Strand = Plus / Plus
Query: 1 atcatcatcttgaccaatctgaaaatgtagctccctggtgtaaggtcttctatgccaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcatcatcttgaccaatctgaaaatgtagctccctggtgtaaggtcttctatgccaacc 260
Query: 61 tatataaaactgtctgagagcattaagtgagcaaagatgaatagcaccactgtgctttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatataaaactgtctgagagcattaagtgagcaaagatgaatagcaccactgtgctttga 320
Query: 121 atgtgaaatcactacaatagaaaatctatttgcacacttggcactgtcagcttggcaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtgaaatcactacaatagaaaatctatttgcacacttggcactgtcagcttggcaccc 380
Query: 181 agctgctggtgcttttttaaatttttgaacgttatgagatacttatgagttagaaacttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agctgctggtgcttttttaaatttttgaacgttatgagatacttatgagttagaaacttg 440
Query: 241 attgaagaagtttgttattggggctagttctgaagttttatagcttggctccatttactt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 attgaagaagtttgttattggggctagttctgaagttttatagcttggctccatttgctt 500
Query: 301 ctagttctctgtttgcatattgccatt--g---aa-----atgtaatggagtggctttct 350
||||||||||||||||||||||||||| | || ||||||||||||||||||||
Sbjct: 501 ctagttctctgtttgcatattgccattttgcataatgccaatgtaatggagtggctttct 560
Query: 351 gctctagttaatgtgttcttccccttanagaactgtgtgttctcaggagctgtaattcaa 410
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 561 gctctagttaatgtgttcttccccttaaagaactgtatgttctcaggagctgtaattcaa 620
Query: 411 agtgaagactttctactttaa 431
|||||||||||||||||||||
Sbjct: 621 agtgaagactttctactttaa 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
