GGGGTTTTTTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCCACTTCTCTGCACTAGTACAATGGACTTTGAGTCCTA
TCAAACTGTGACTTCTTGTAAGTTGTAAGAATACAGATTAAAAGTATATA
AAGAAAGTAAAAGTGAGACTATTATAAATAAGCTTATGTTTGAGCTCATT
ACCTAACTATAACAAAGTCACAAATGCAATCAGTTTAAAGTTTATTTTGA
ACCCTGCCTTTTGAGGATACCAGTGACTAAGGGGTGAGGTTGATTGTGTT
AAACTTCCAGTGAGAAAGTATAGCATAGCAGTAAAGTAGGGTGAACCTAA
ACATGAGCTCACGTCTCATAAGCAAAGGAAACTCATGAGGGTTCTAAAAG
GTCCTTCAAGGGAACACTTCCAATGACCCAAATATTGCTCAGACCACACT
TCTTAGCTCCACTACCTCTCAGTATTTACCTAGAAGACAAACCATTCTAC
ACCTATGCCTTTGGGGGACATTGAGGATCCAAAAAATAGGAAAGCAAACC
AAAGCACAAAACATCATTTAAAATGAGTGGGTTAATCACAATGCAAATTT
TCTCTCTTTTCCCTTTTGAGGCATGAAAAACTTTTATTAAGGGCTGAGAG
AAAACCAACGGAGGGGCGGATGGGAAATCACACACCTGCTGGAAAGAAGG
AATTAGAAAAAGGGGTTAAAAAGGTAAAACCTGCCCTTTTTCTGTGGGAA
CCCC

NNNTTAAACCGATGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGAAGGTGGACTTCAG
AAAATCGAATAACCCCATTAAAAAATGGGGCTCAGAACTGAACAAAGAAT
TCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATGTTCA
ACATCCTTAATCATCAGGGAAATGAAAATCAAAACAAACTTGAGATTCCA
CCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGAT
GCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGAT
TGCAGGATTGTACAGCCACTCTGGAAATCAGTCTGGCAGTTCCTCAGAAA
ATTGGACATAGTACTACCGGAGGATCTAGCAATACCTCTCCTGGGCATAT
ATCCAGAAGATGCCCCACCTGGTAAGAAGGACACATGCTCCACTATGTTC
ATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCC
CCTCACAGAGGAATGGATACCGAANATATGGTACTTTTACACAATGGAGT
ACTACTCCGAATTTANAAGGATGATTTTATGAAATCCTAGCCCAATGGAT
GGACCCGGAGGGGATCCTCCTTTGATGGGGGAACCCTTTTCTCAAGGGAC
TCCTCCCCAAATTACTCCCCCGTTAAGGGGAATATACCCCCCCCCCTGAT
ATCCCAAA

Query= MSMg01no421_g23.b1 MSMg01no421_g23.b1 CHROMAT_FILE:
MSMg01no421_g23.b1 PHD_FILE: MSMg01no421_g23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:36 2005
         (517 letters)



>mm_chr8_103725868_103726784
          Length = 917

 Score =  899 bits (465), Expect = 0.0
 Identities = 501/513 (97%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccacttctctgcactagtacaatggactttgagtcctatcaaactgtgacttctt 64
           |||||||||||||| | ||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 717 gaattccacttctcggtactagtaaaatggactttgagtcctatcaaattgtgacttctt 658

                                                                       
Query: 65  gtaagttgtaagaatacagattaaaagtatataaagaaagtaaaagtgagactattataa 124
           |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||
Sbjct: 657 gtaagttgtaagaatacagattaaaagtatataaagaaaaaaaaagtgagactattataa 598

                                                                       
Query: 125 ataagcttatgtttgagctcattacctaactataacaaagtcacaaatgcaatcagttta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ataagcttatgtttgagctcattacctaactataacaaagtcacaaatgcaatcagttta 538

                                                                       
Query: 185 aagtttattttgaaccctgccttttgaggataccagtgactaaggggtgaggttgattgt 244
           ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 537 aagtttattttgaaccctgccttttgaggattccagtgactaaggggtggggttgattgt 478

                                                                       
Query: 245 gttaaacttccagtgagaaagtatagcatagcagtaaagtagggtgaacctaaacatgag 304
           ||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 477 gttaaacttccagtgaggaagtatagcatagcaggaaagtagggtgaatctaaacatgag 418

                                                                       
Query: 305 ctcacgtctcataagcaaaggaaactcatgagggttctaaaaggtccttcaagggaacac 364
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ctcacgtttcataagcaaaggaaactcatgagggttctaaaaggtccttcaagggaacac 358

                                                                       
Query: 365 ttccaatgacccaaatattgctcagaccacacttcttagctccactacctctcagtattt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ttccaatgacccaaatattgctcagaccacacttcttagctccactacctctcagtattt 298

                                                                       
Query: 425 acctagaagacaaaccattctacacctatgcctttgggggacattgaggatccaaaaaat 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 acctagaagacaaaccattctacacctatgcctttgggggacattgaggatccaaaaaat 238

                                            
Query: 485 aggaaagcaaaccaaagcacaaaacatcattta 517
           |||||||||||||||||||||||||||||||||
Sbjct: 237 aggaaagcaaaccaaagcacaaaacatcattta 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space:   459849
Effective search space used:   459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)