Query= MSMg01no423_h15.b1 MSMg01no423_h15.b1 CHROMAT_FILE:
MSMg01no423_h15.b1 PHD_FILE: MSMg01no423_h15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:10 2005
(451 letters)
>mm_chr8_125269936_125270786
Length = 851
Score = 766 bits (396), Expect = 0.0
Identities = 435/448 (97%), Gaps = 1/448 (0%)
Strand = Plus / Plus
Query: 5 gaattcttgtctatcaacttccgagggctgggagtccctgtggggagatccaagggacag 64
||||||||||| || ||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 204 gaattcttgtccatgaacttccaagggctgggagtccctgtggggagttccaagggacag 263
Query: 65 tagg-ttaacattccagctcctggtggctggtccccaaaaggaggccagtgctccaggtg 123
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tagggttaacattccagctcctggtggctggtccccaaaaggaggccagtgctccaggtg 323
Query: 124 aagggtcctaaactcttcaatcctggctctggctccaggcagctctgtggcctcaggaaa 183
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 324 aagggtcctaaactcttcaatcctggctctggctccaggcagctctgtggtttcaggaaa 383
Query: 184 gcattgggacctctctgagctgtttctttttttagctgtggaggcgttgaactagaatcc 243
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gcactgggacctctctgagctgtttctttttttagctgtggaggcgttgaactagaatcc 443
Query: 244 agcagcatggcttctcgctctgtggtcagatatagtcaaccaagtcagacaactggcaga 303
|||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 444 agcagcatggctcctcgctctgtggtcagggacagtcaaccaagtcagacaactggcaga 503
Query: 304 gacaaggccatatggaagcagatgtccctggtgtctcagtgaacttgccgggttactccc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gacaaggccatatggaagcagatgtccctggtgtctcagtgaacttgccgggttactccc 563
Query: 364 atgggattagccccctaagcctggtcagagcaaaggacgttgtagtccccaggcaggtgg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atgggattagccccctaagcctggtcagagcaaaggacgttgtagtccccaggcaggtgg 623
Query: 424 gaagagaatatgagttttcattcagtct 451
|||||||||| |||||||||||||||||
Sbjct: 624 gaagagaatacgagttttcattcagtct 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no423_h15.g1 MSMg01no423_h15.g1 CHROMAT_FILE:
MSMg01no423_h15.g1 PHD_FILE: MSMg01no423_h15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:10 2005
(444 letters)
>mm_chr8_125443913_125444757
Length = 845
Score = 658 bits (340), Expect = 0.0
Identities = 361/368 (98%), Gaps = 1/368 (0%)
Strand = Plus / Minus
Query: 1 cagtgtaatcgggtctccctatacagaggacctggctcctgcaagtgttttggctgtggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 cagtgtaatcgggtctccctatacagaggacctggctcctgcaagtgttttggctgtggc 309
Query: 61 tcattcgtcctttgtag-ccccagtcagacagtcctatttgttgatgttctgttgtctgt 119
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tcattcgtcctttgtagcccccagtcagacagtcctatttgttgatgttctgttgtctgt 249
Query: 120 agtagagggtgacttccaatactcaggtcttttcctatcatttgttaattttgttgttga 179
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 248 agtagagggtgacttccaatactcaggtcttttcctagcatttgttaattttgttgttga 189
Query: 180 cagcttctatgtgtaactgtcctgaaacttgttctgtagactggacttgcttcggactca 239
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 188 cagcttctatgtgtaactgtcctgaaacttgttctgtagactggacttgctttggactca 129
Query: 240 gagtttttctcctgcttctgcctctggagcgctggtattaaaggtgctcaccatctcggc 299
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 gagggatcctcctgcttctgcctctggagcgctggtattaaaggtgctcaccatctcggc 69
Query: 300 caggctgttgttaatttatgaattttgtagcttctcactgacttgctagactgtgcactt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 caggctgttgttaatttatgaattttgtagcttctcactgacttgctagactgtgcactt 9
Query: 360 ggacttgt 367
||||||||
Sbjct: 8 ggacttgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 845
Length adjustment: 10
Effective length of query: 434
Effective length of database: 835
Effective search space: 362390
Effective search space used: 362390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
