Query= MSMg01no425_o12.b1 MSMg01no425_o12.b1 CHROMAT_FILE:
MSMg01no425_o12.b1 PHD_FILE: MSMg01no425_o12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:15 2005
(630 letters)
>mm_chr8_62574174_62575203
Length = 1030
Score = 255 bits (132), Expect = 6e-72
Identities = 151/160 (94%), Gaps = 6/160 (3%)
Strand = Plus / Minus
Query: 6 gaattcatagcttttacc---aactcttccagggatagagacctgcagtctcttattgta 62
||||||||||||| || ||||||||||||||||||||||||||| |||||||||||
Sbjct: 362 gaattcatagctt---ccaggaactcttccagggatagagacctgcagcctcttattgta 306
Query: 63 gggcatgtaggactctgataccagacaggcataagagctggtaaagctgaatgaggccaa 122
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gggcatgtaggactctgatactagacaggcataagagctggtaaagctgaatgaggccaa 246
Query: 123 gccctgggaatctcagagatctgagaatggcaggagtgag 162
||||||||||| ||||||||||||||||||||||||||||
Sbjct: 245 gccctgggaatatcagagatctgagaatggcaggagtgag 206
Score = 91.6 bits (47), Expect = 2e-22
Identities = 50/51 (98%)
Strand = Plus / Minus
Query: 572 agtgaggttattctcgacttgcctctgtacctgctctggaacacttagcca 622
|||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 agtgaggtcattctcgacttgcctctgtacctgctctggaacacttagcca 161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_o12.g1 MSMg01no425_o12.g1 CHROMAT_FILE:
MSMg01no425_o12.g1 PHD_FILE: MSMg01no425_o12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:15 2005
(527 letters)
>mm_chr8_62440209_62441136
Length = 928
Score = 975 bits (504), Expect = 0.0
Identities = 522/528 (98%), Gaps = 1/528 (0%)
Strand = Plus / Plus
Query: 1 accctaacaaacatctgtgaaaaccaaggaaaaagagggcagaatttgagaaacaaataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accctaacaaacatctgtgaaaaccaaggaaaaagagggcagaatttgagaaacaaataa 260
Query: 61 gcaaacaacagcatttctcaattccaccatgactcctttcttgagacctcaacagatggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaaacaacagcatttctcaattccaccatgactcctttcttgagacctcaacagatggc 320
Query: 121 gaagtacaagacccagaattattgtggcaaagatgagtttattcagtatgttgggagtac 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 gaagtacaagacccagaattattgtggcaaagatgagtttgttcagtatgttgggagtac 380
Query: 181 aaaaagcaaaagtaaaagaaacacaaagaaatggatcacatcacttaggtaaataaactt 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 aaaaagcaaaagtaaaagaaacacaaagaaatggatcacatcacttgggtaaataaactt 440
Query: 241 ttacatttcctaaagacagatgcacataattctgcctgtgttagtgagtgatgttaggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttacatttcctaaagacagatgcacataattctgcctgtgttagtgagtgatgttaggag 500
Query: 301 tccattaagcataatgggtcaaatctccctaaaaacctatagaaaatgtgaaaatggatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tccattaagcataatgggtcaaatctccctaaaaacctatagaaaatgtgaaaatggatc 560
Query: 361 actgggatctttgcactggggaggtaaattgtacaaatggaataaggaaaaaggagtaaa 420
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 561 actgggatctttgcactggggaggcaaattgtacaaatggaataaggaaaaaggagtaaa 620
Query: 421 ttgtaaaaa-agggtatctgtcctgagacccaataagccactgacagagtaacaaattta 479
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgtaaaaacagagtatctgtcctgagacccaataagccactgacagagtaacaaattta 680
Query: 480 tttcaacctaatcatgaggggctggaaactaaacagaaacggaacaaa 527
||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 681 tttcaacctaatcatgaggggctgggaactaaacagaaacggaacaaa 728
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 928
Length adjustment: 10
Effective length of query: 517
Effective length of database: 918
Effective search space: 474606
Effective search space used: 474606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
