Query= MSMg01no426_a17.b1 MSMg01no426_a17.b1 CHROMAT_FILE:
MSMg01no426_a17.b1 PHD_FILE: MSMg01no426_a17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:26 2005
(423 letters)
>mm_chr8_17096134_17096956
Length = 823
Score = 700 bits (362), Expect = 0.0
Identities = 404/420 (96%), Gaps = 6/420 (1%)
Strand = Plus / Minus
Query: 5 gaattcacataaccct-catcatccattttaaccaaagttcgtgaagataggatcagttt 63
|||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 541 gaattcacataa-cctacatcatccattttaaccaaagtttgtgaagataggatcagttt 483
Query: 64 gctacagtttgacatttttacatcttggctaatgtctttcttatgtggtcaggtatatta 123
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 482 gttacagtttgacatttttacatcttggctaatgtctttcttatgtggtcaggcatatta 423
Query: 124 actgaatgtaaaatctgaataatggaaaactgttgaagatatgcccaattacctcaggga 183
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 422 gctgaatgtaaaatctgaataatggaaaactgttgaagatatgcccaattaactcaggga 363
Query: 184 gcactgtcatttcaacagagctctacaaataagtatttatcattgtttcccaagtgtgtt 243
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 362 gcactgtcatttcaacagagatctacaaataagtatttatcattatttcccaagtgtgtt 303
Query: 244 aatatcaataataactaatgacataaagtcaccatcctttaatggatgtgagcacacatt 303
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 302 aatatcaataataactaatgacataaagccaccatcctttaatggatgtgagcacacatt 243
Query: 304 ttcacacagaaggttaacaacctcaagcatactcactgacatacactaacaaacaaacac 363
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 242 ttcacacagaaggttaacaacctcaagcatattcactgacatacactaacaaaca----c 187
Query: 364 attcacacacacacacacacaaatatacacacttataaacactttgtagcatctgtagaa 423
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 186 attcacacacacacacacacaaatatacacacttataaacactttgtaccatctgtagaa 127
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_a17.g1 MSMg01no426_a17.g1 CHROMAT_FILE:
MSMg01no426_a17.g1 PHD_FILE: MSMg01no426_a17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:26 2005
(572 letters)
>mm_chr8_16984584_16985554
Length = 971
Score = 1044 bits (540), Expect = 0.0
Identities = 564/572 (98%), Gaps = 1/572 (0%)
Strand = Plus / Plus
Query: 1 cttgctgtgtgcatatgcctctgttactctgagatctcaggtgaccttcctgttggtacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttgctgtgtgcatatgcctctgttactctgagatctcaggtgaccttcctgttggtacc 260
Query: 61 tccagctgtggttcttttcacctctaggatcatgggcaaactgtcccgactggactgaat 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 tccagctgtggttcttttcacctctaggatcatgggcaaactgtcccgactgtactgaat 320
Query: 121 actagtttcttctgtgacaggtaggagtgagggtgagagcaagagggaaaactattgatc 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actagcttcttctgtgacaggtaggagtgagggtgagagcaagagggaaaactattgatc 380
Query: 181 acaggcctatagaatcatcatcatcatgaccagtaagtagcctttctctttggccagaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaggcctatagaatcatcatcatcatgaccagtaagtagcctttctctttggccagaga 440
Query: 241 tcacccaatagctcctgcacctgtttctatgccactgtctatataaaagctattttcaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcacccaatagctcctgcacctgtttctatgccactgtctatataaaagctattttcaca 500
Query: 301 agtggacaagcctcttcaaagttcaaatcagatttccctccctctggatgttctgttatg 360
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 501 agtggacaagcctcttcaaagttcaaatcagatttccctccctctgtatgttttgttatg 560
Query: 361 gacaccagtgacctccatacacaagttccgtgtgtcaacaacatttctttttttaaagaa 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 561 gacaccagtgacctccatacacaagttccgtgtgtcaacaacatttcttttta-aaagaa 619
Query: 421 atcaacatgattacacttcctaagatcctgtaatcatgccctcttttcctgtatctgctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atcaacatgattacacttcctaagatcctgtaatcatgccctcttttcctgtatctgctt 679
Query: 481 cctgtgccactgtggcctttaatcacaaacctgcagaatcgttgctaaccttatgatctt 540
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cctgtgccactgtgtcctttaatcacaaacctgcagaatcgttgctaaccttatgatctt 739
Query: 541 gctgatttttaatgtggtttactctctgcagg 572
|| |||||||||||||||||||||||||||||
Sbjct: 740 gcggatttttaatgtggtttactctctgcagg 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 971
Length adjustment: 10
Effective length of query: 562
Effective length of database: 961
Effective search space: 540082
Effective search space used: 540082
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
