Query= MSMg01no426_c20.b1 MSMg01no426_c20.b1 CHROMAT_FILE:
MSMg01no426_c20.b1 PHD_FILE: MSMg01no426_c20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:37 2005
(493 letters)
>mm_chr8_4496741_4497633
Length = 893
Score = 909 bits (470), Expect = 0.0
Identities = 485/490 (98%)
Strand = Plus / Plus
Query: 4 ggaattcatgccagatatcctggctctgttaaaattctgctatggtgattcaactaagga 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatgccagatagaatggctctgttaaaattctgctatggtgattcaactaagga 263
Query: 64 tggattgggcagagaaacagtattccaaaccaaaaaggataagcagatacaaggctctaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 264 tggattgggcagagaaacagtattccaaaccaaaaaggataagcagatacaaggctccaa 323
Query: 124 gcacattgctgggcacttggaggagtaattagtagagatttgaaagaacattgagatcta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcacattgctgggcacttggaggagtaattagtagagatttgaaagaacattgagatcta 383
Query: 184 tgggggctggagagattgctcattggttcttgcttgcagaggacctgagttcagatccca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgggggctggagagattgctcattggttcttgcttgcagaggacctgagttcagatccca 443
Query: 244 gcacccccaattatgtggcttacaacgacttggtgaaactctagctccagggaatttaat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gcacccccaattatgtggcttacaacgacttggtgaaactctagctccagggaatttaat 503
Query: 304 gccctcttttggcctcttcatgcaacacagtcatgttcttgtgttttctgccagccccac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gccctcttttggcctcttcatgcaacacagtcatgttcttgtgttttctgccagccccac 563
Query: 364 cccaacacctatcaactaactaatcacccctcaccctacaaaacaaccttgaagtctagg 423
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 564 cccaacacctatcaactaactaaccacccctcaccctacaaaacaaccttgaagtctagg 623
Query: 424 ggagagcaggatggctaggcctcaacaaggaatttatatgttattttaatcctagagaac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ggagagcaggatggctaggcctcaacaaggaatttatatgttattttaatcctagagaac 683
Query: 484 aaaacagtgg 493
||||||||||
Sbjct: 684 aaaacagtgg 693
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 893
Length adjustment: 10
Effective length of query: 483
Effective length of database: 883
Effective search space: 426489
Effective search space used: 426489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_c20.g1 MSMg01no426_c20.g1 CHROMAT_FILE:
MSMg01no426_c20.g1 PHD_FILE: MSMg01no426_c20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:37 2005
(464 letters)
>mm_chr8_4601110_4601973
Length = 864
Score = 789 bits (408), Expect = 0.0
Identities = 411/412 (99%)
Strand = Plus / Minus
Query: 1 aactcatatatatctccaggccaaacggaataaaaaaaacccagaagcacagtggaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aactcatatatatctccaggccaaacggaataaaaaaaacccagaagcacagtggaaaag 353
Query: 61 tatctggtaaacaagttcatgtttacatgggccaggcaggaacaagaaatgactcagggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tatctggtaaacaagttcatgtttacatgggccaggcaggaacaagaaatgactcagggc 293
Query: 121 tattgcagtttggctaaaaacacagtgtgctgatgccttgggtggcaagctagcaaagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tattgcagtttggctaaaaacacagtgtgctgatgccttgggtggcaagctagcaaagca 233
Query: 181 actcatcttagagagggtgtcagggcccaacagtctgcaagggaaagagtggggatggag 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 232 actcatcttagagagggtgtcagggcccaacagtctgcaagggagagagtggggatggag 173
Query: 241 ggacaagagatgaaaagaatggagacaagacagtctgtctgatcaactctcatttattga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 ggacaagagatgaaaagaatggagacaagacagtctgtctgatcaactctcatttattga 113
Query: 301 aaggaaattatgaatatataagtgccagtggggagtgcagctggagacacttaaccacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 aaggaaattatgaatatataagtgccagtggggagtgcagctggagacacttaaccacaa 53
Query: 361 atgccttgcagctgggggcactaaactgtcaggagccataatgggacaagct 412
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 atgccttgcagctgggggcactaaactgtcaggagccataatgggacaagct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
