Query= MSMg01no432_a13.b1 MSMg01no432_a13.b1 CHROMAT_FILE:
MSMg01no432_a13.b1 PHD_FILE: MSMg01no432_a13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:36 2005
(520 letters)
>mm_chr8_123500516_123501435
Length = 920
Score = 942 bits (487), Expect = 0.0
Identities = 514/533 (96%), Gaps = 17/533 (3%)
Strand = Plus / Plus
Query: 5 gaattccttccaaagaaacaggcggcttccacctttgggccaacagttctgtgggcaaca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 gaattccttccaaagaaacaggcggcttccacctttgggccaacagttctgtgggcaaca 247
Query: 65 tttgttttctattttcttcctttctttctttctt----tctttttttttttttt------ 114
|||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 248 tttgttttctattttcttcctttctttctttctttctctctttttttttttttttttttt 307
Query: 115 -------taacatcgaatccttttataaactccccaaagtttcagtttatccagtgacaa 167
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ttttttgtaacatcgaatccttttataaactccccaaagtttcagtttatccagtgacaa 367
Query: 168 ttagtttatgtcatttctgaagtggatttagatttaagtgataaaattacaagccaaaat 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ttagtttatgtcatttctgaagtggatttagatttaagtgataaaattacaagccaaaat 427
Query: 228 tgcaaccacaatggaaccccgggttcgtgtttggtctttgagaccacaacagaaagatgg 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgcaaccacaatggaaccccgggttcgtgtttggtctttgagaccacaacagaaagatgg 487
Query: 288 cgggccggtgccaaggagcaggaggaagccgcaatcaccgggcattcctgtccggggacc 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 cgggccggtgccaaggagcaggaggaagccgcaatcaccgggcattcctgtccggggacc 547
Query: 348 ggccccctggctgcttcctgtgctgcagagactgactctggggcgacaggtggaaggaga 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ggccccctggctgcttcctgtgctgcagagactgactctggggcgacaggtggaaggaga 607
Query: 408 agcggcctagtgggccgtttccactccagccccgtgccgcagcctttctttatgccctgt 467
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 608 agcggcctggtgggccgtttccactccagccccgtgccacagcctttctttatgccctgt 667
Query: 468 gtgagcctgggccccctctgaagtctgggctgtctgattgcatctgggtttcg 520
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gtgagcctgggccccctctgaagtctgggctgtctgattgcatctgggtttcg 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space: 464100
Effective search space used: 464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_a13.g1 MSMg01no432_a13.g1 CHROMAT_FILE:
MSMg01no432_a13.g1 PHD_FILE: MSMg01no432_a13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:36 2005
(425 letters)
>mm_chr8_123638864_123639688
Length = 825
Score = 810 bits (419), Expect = 0.0
Identities = 422/423 (99%)
Strand = Plus / Minus
Query: 1 gttcctctccccttcacgacggggtcgggctgggagggaaggcttagtgggaatgccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gttcctctccccttcacgacggggtcgggctgggagggaaggcttagtgggaatgccaaa 564
Query: 61 ctgggaaggtaacacctaaggaacgattggtccttcgtcttcgctgctacttaggtgatc 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 563 ctgggaaggtaacacctaaggaaccattggtccttcgtcttcgctgctacttaggtgatc 504
Query: 121 catctgagtcctccaaacaatttcgtggggttcagggaagcgcgtgaacccaactgttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 catctgagtcctccaaacaatttcgtggggttcagggaagcgcgtgaacccaactgttgc 444
Query: 181 tttcctggtctcctctcccgcatagacgagggctagctttccctgccatccatcccggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tttcctggtctcctctcccgcatagacgagggctagctttccctgccatccatcccggcc 384
Query: 241 tctcccttctccccacctatgaaagcgctgtctggaggttaggacaaggcagccagcccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tctcccttctccccacctatgaaagcgctgtctggaggttaggacaaggcagccagcccc 324
Query: 301 cgggagctggtgtccccgttcggcgtggggagctccaagcctgcactccatcgccggctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cgggagctggtgtccccgttcggcgtggggagctccaagcctgcactccatcgccggctt 264
Query: 361 cgtcactggaaacgcaaaggagcgcggcactgtgtagcctcggacccgcttccctagctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cgtcactggaaacgcaaaggagcgcggcactgtgtagcctcggacccgcttccctagctg 204
Query: 421 ttg 423
|||
Sbjct: 203 ttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
