Query= MSMg01no432_g11.b1 MSMg01no432_g11.b1 CHROMAT_FILE:
MSMg01no432_g11.b1 PHD_FILE: MSMg01no432_g11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:07 2005
(471 letters)
>mm_chr8_124456404_124457274
Length = 871
Score = 567 bits (293), Expect = e-166
Identities = 314/321 (97%)
Strand = Plus / Minus
Query: 151 attattatacctaagtacactgtagctgacttcagacccaccagaagagggcatcccagg 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 attattatacctaagtacactgtagctgacttcagacccaccagaagagggcatcccagg 812
Query: 211 accattggtagttaaggctacaggaggggcacggcccaatccttgaaaaacagaggttta 270
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 accattagtagttaaggctacaggaggggcacggcccaatccttgaaaaacagaggttta 752
Query: 271 atcatattcagtcatgaacctagtttgtctttactctaaaatgggtttgaaacctaaaac 330
|||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 atcataaacagtcacgaacctagtttgtctttactctaaaatgggtttgaaacctaaaac 692
Query: 331 agagacaggctggctcttcagctgtcccttgaccctgacagtctcagtagccccaatgac 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 agagacaggctggctcttcagctgtcccttgaccctgacagtctcagtagccccaatgac 632
Query: 391 tgactatcggtacagtaaggtacagtaggtggctgtggtttgcggagccctctgaatcac 450
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 631 ggactatcggtacagtaaggtacagtaagtggctgtggtttgcggagccctctgagtcac 572
Query: 451 cgaggagctcacgtttgctct 471
|||||||||||||||||||||
Sbjct: 571 cgaggagctcacgtttgctct 551
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_g11.g1 MSMg01no432_g11.g1 CHROMAT_FILE:
MSMg01no432_g11.g1 PHD_FILE: MSMg01no432_g11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:07 2005
(446 letters)
>mm_chr8_124279257_124280103
Length = 847
Score = 820 bits (424), Expect = 0.0
Identities = 441/450 (98%), Gaps = 7/450 (1%)
Strand = Plus / Plus
Query: 1 tttaagagatggaaagaagggcagaatttctacctcagtactgaggccagacaccactct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaagagatggaaagaagggcagaatttctacctcagtactgaggccagacaccactct 260
Query: 61 gtcttaaccctaccccaacaaccccagttagtgatgggtgtggctgttcacctgggattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcttaaccctaccccaacaaccccagttagtgatgggtgtggctgttcacctgggattt 320
Query: 121 tagggacctgaaatgtgttttgttgtaaacatactacttcacacagaaaggtgggaagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagggacctgaaatgtgttttgttgtaaacatactacttcacacagaaaggtgggaagtg 380
Query: 181 acagccagaagagcgtggtgctggctgaaagctgatatgtgcaccctacatcccgagcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagccagaagagcgtggtgctggctgaaagctgatatgtgcaccctacatcccgagcat 440
Query: 241 ccaatgatttaca----tccagtggcttccttttgctgtctgctttgtatttagggaccc 296
||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaatga---acaaacatccagtggcttccttttgctgtctgctttgtatttagggaccc 497
Query: 297 tggtggataagggacagttcagaggctgggagcactggcgatagctctgatgggtaccag 356
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 498 tggtggataagggacagttcagaggctgggagcactggccatagctctgataggtaccag 557
Query: 357 gtggattcttttattttttctttttttgaaacaaggcctacgtagccctggcttccttgg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gtggattcttttattttttctttttttgaaacaaggcctacgtagccctggcttccttgg 617
Query: 417 aattcgctatgtaaaccaggctggagctaa 446
||||||||||||||||||||||||||||||
Sbjct: 618 aattcgctatgtaaaccaggctggagctaa 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 847
Length adjustment: 10
Effective length of query: 436
Effective length of database: 837
Effective search space: 364932
Effective search space used: 364932
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
