NTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCCGAGAGGATTCGCGG
AATTCTCCACTTTCGCTTTACCCACCTAATGGACTGTGCTCAAATGCACT
TTGCTGCCAAAAGTGGAGGTTACCTTGTTGCTCCCTAGTCCTCTCTCCCA
CAGTTCCTTCTCTATTTTTCACATGTGAGATTCTTTTCAACATTCATATT
AATATATATAATATAGTTGTTAATATATACATATATTAGTGTGAATTAAG
TACTCTACTAATCTTATTCACAAATATGCATCATTTTATATCATCAACTC
TTATTATCTCATATATAGGATAGACACCAGCTACCTTAATCAGATCAGTT
ACTAGACTTTTATGTTCAGTGTTTTTTATCCCTCATTTCATAATTGCTTT
AGCAGGATATTAATACATTTATTTATTCACATTGTTTTCAACATTTCCAT
CGGATACTTTGTCTTTTCCTCATATAATATGTGGTGTATGACATTAAGTT
AAAGGCAGAAGCTTACATTGGAAGGAATTATCAGATTCTGTTAAAGTAGA
CTTCATTGTAGACAGAAGGAAAAGGCGTGGAAAGTTGTTGCTCAATACCT
TTTTGGGGGTCACAATTACGGACGTATGTTTTCAGGGGCCCTTGCTGCCA
ATGGCCAGTTTAAAGTTTCAAACTCATATGTCATGAGCGTCCATCCTTTG
GAAAATTATTACCCTTCCCAAAACGGGATCACCTGGTTA

ATGAAGTGGGAGGCCTGGNGGNCGCCTGTTTCAAAAACTGAGGTGAACTA
TAGAAGTACTAAAACAATTCAAGCTTTTAATGGAGTTCTGCTCTGCTTGC
TGCCCTCACTTCCCTCTTAATCTAAGAATTGCATAATGCTAAGGGGCTTC
AAGCACTCACAATAATCTATTTTAGGCATTGCTGCTGGAACAGATGAATA
ACTCAATCACCATCCTAAGAAAGAACTTAGAGAAGAAGGTTGTTTTTAAT
GACCACCATCCTTAGAAAGTAGTTGGAAAAATAAAATCATTAGTTAAGGT
AGATTATGAAGCTCGGTTCTTCTGGCTCTAATACAGAAAATCTTAGGGAA
CTATTTGAACCTCAGAAAGGCACACTCTTCTTAGTTAAGCTTGGGACCAT
TTATGGCGAGGCAACAACAACTATGGCAGCACTGGCTGATGTGACTCTCA
CTGAGGCTGGGCTGGCGATGACGATTGACTCCCTATATTCATTCTCGCTT
CCATTCTCCTGACCTGACTCACCCCTAACCGCTGATGGCCTTATATACCT
TCCGAGGATTTACATGCCATATGACTTCTCTCACATATTAAGCCCACACT
CGCCGCTGCTTCCTCCTATTCCTTTACATATCCTTTTTTTTTTTTTTTTT
TTCCATTAATCCCCCCCCTTATTCCGCCATTTTTTCTCCGGCCGTTTTTT
TTCTCCCTATTATTTTACTACCTCCCCCCTG

Query= MSMg01no439_f09.b1 MSMg01no439_f09.b1 CHROMAT_FILE:
MSMg01no439_f09.b1 PHD_FILE: MSMg01no439_f09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:26 2005
         (485 letters)



>mm_chr8_45131519_45132402
          Length = 884

 Score =  845 bits (437), Expect = 0.0
 Identities = 470/481 (97%), Gaps = 1/481 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctccactttcgctttacccacctaatggactgtgctcaaatgcactttgctgcca 64
           |||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 873 gaattctctactgtcgctttacccacctaatggcctgtgctcaaatgcactttgctgcca 814

                                                                       
Query: 65  aaagtggaggttaccttgttgctccctagtcctctctcccacagttccttctctattttt 124
           ||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 813 aaagtggaggttaccttattgctccctagtcctctctgctacagttccttctctattttt 754

                                                                       
Query: 125 cacatgtgagattcttttcaacattcatattaatatatataatatagttgttaatatata 184
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ctcatgtgagattcttttcaacattcatattaatatatataatatagttgttaatatata 694

                                                                       
Query: 185 catatattagtgtgaattaagtactctactaatcttattcacaaatatgcatcattttat 244
           |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 693 catatattagtgtgaattaagtactctagt-atcttattcacaaatatgcatcattttat 635

                                                                       
Query: 245 atcatcaactcttattatctcatatataggatagacaccagctaccttaatcagatcagt 304
           |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 634 atcatcaattcttattatctcatatataggagagacaccagctaccttaatcagatcagt 575

                                                                       
Query: 305 tactagacttttatgttcagtgttttttatccctcatttcataattgctttagcaggata 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tactagacttttatgttcagtgttttttatccctcatttcataattgctttagcaggata 515

                                                                       
Query: 365 ttaatacatttatttattcacattgttttcaacatttccatcggatactttgtcttttcc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ttaatacatttatttattcacattgttttcaacatttccatcggatactttgtcttttcc 455

                                                                       
Query: 425 tcatataatatgtggtgtatgacattaagttaaaggcagaagcttacattggaaggaatt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tcatataatatgtggtgtatgacattaagttaaaggcagaagcttacattggaaggaatt 395

            
Query: 485 a 485
           |
Sbjct: 394 a 394


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 884
Length adjustment: 10
Effective length of query: 475
Effective length of database: 874
Effective search space:   415150
Effective search space used:   415150
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)