Query= MSMg01no441_f16.b1 MSMg01no441_f16.b1 CHROMAT_FILE:
MSMg01no441_f16.b1 PHD_FILE: MSMg01no441_f16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:06 2005
(525 letters)
>mm_chr8_110702420_110703345
Length = 926
Score = 988 bits (511), Expect = 0.0
Identities = 520/523 (99%), Gaps = 1/523 (0%)
Strand = Plus / Minus
Query: 4 ggaattctagaatatcctctccttctgcatacagcgctgcctgctattcttccccgttta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 ggaattctagaatatcctctccttctgcatacagcgctgcctgctattcttccccgttta 667
Query: 64 gatacgccaagctgccaaagttctaggtctcgacaaagctctgccagataaaacaaatat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gatacgccaagctgccaaagttctaggtctcgacaaagctctgccagataaaacaaatat 607
Query: 124 ttcattaacaatctgtccccaggtgctacagatgttccacctgaaatgaaagtagaaatt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ttcattaacaatctgtccccaggtgctacagatgttccacctgaaatgaaagtagaaatt 547
Query: 184 catatggtctcaccctccagcggtctcattctctggcaaaatagaggtttaattaaggtc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 catatggtctcaccctccagcggtctcattctctggcaaaatagaggtttaattaaggtc 487
Query: 244 aaatctcccaagccgtagcacaggatgaatttaggtcagttcaaacaggtattctagtta 303
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 aaacctcccaagccgtagcacaggatgaatttaggtcagttcaaacaggtattctagtta 427
Query: 304 atttgttctaaatggttgtgtttatatggtgagggaagggaagggccttttaaaaatgaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 atttgttctaaatggttgtgtttatatggtgagggaagggaagggccttttaaaaatgaa 367
Query: 364 ggctcctggctggcatagaatgggggagaagaagcaaaagccaaggttctaaacatacag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ggctcctggctggcatagaatgggggagaagaagcaaaagccaaggttctaaacatacag 307
Query: 424 aacacacaccacagaaagacgacttccacagacagaagaaatgtctatgtcacttccttg 483
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 306 aacacacaccacagaaagacgacttccacagacggaagaaatgtctatgtcacttccttg 247
Query: 484 ttctagtgggg-ctgaaccccagggccttgcatatattccaga 525
||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 246 ttctagtggggactgaaccccagggccttgcatatattccaga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 926
Length adjustment: 10
Effective length of query: 515
Effective length of database: 916
Effective search space: 471740
Effective search space used: 471740
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_f16.g1 MSMg01no441_f16.g1 CHROMAT_FILE:
MSMg01no441_f16.g1 PHD_FILE: MSMg01no441_f16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:06 2005
(507 letters)
>mm_chr8_110529974_110530875
Length = 902
Score = 895 bits (463), Expect = 0.0
Identities = 496/509 (97%), Gaps = 8/509 (1%)
Strand = Plus / Plus
Query: 1 tccttacccaggttttgagatgcactttcaactcaggatgtgcagggatctcagaagaac 60
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccttacctgggttttgagatgcactttcaactcaggatgtgcagggatctcagaagaac 260
Query: 61 agaaggagtacctttgccaaggtcaccctgtgtgtgtctatttgagacaagagtgtcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaggagtacctttgccaaggtcaccctgtgtgtgtctatttgagacaagagtgtcttt 320
Query: 121 gatttcccatcaagatagccaccccccttacaaccagcctctatattgtatattagtcag 180
|||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 321 gatttcccatcaagatagcc-cccccc----aaccagcctctatattgtatattagtcag 375
Query: 181 ggtgctttagaggaatagatacatatatggtttatttaaagagccttgcaggctgtggtc 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 376 ggtgctttagaggaatagatacacatatggtttatttaaagagccttgcaggctgtggtc 435
Query: 241 cagctaatccaacaatagctgtcacttgatggagaggccaaaaattctgtagttgttcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cagctaatccaacaatagctgtcacttgatggagaggccaaaaattctgtagttgttcag 495
Query: 301 tctaagaggttggatgtatcagttggtcttcagtctacattggaatcctgaagaggcaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tctaagaggttggatgtatcagttggtcttcagtctacattggaatcctgaagaggcaga 555
Query: 361 ctttaacaattgtgtaggaatgccccatcagtagaagaagacagggaattgctttgtcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ctttaacaattgtgtaggaatgccccatcagtagaagaagacagggaattgctttgtcag 615
Query: 421 tgaga-gtgagggcaagtggg-aaaaaacaaacccaagacccttcttccctggtctttta 478
||||| ||||||||||||||| |||||| |||||||||||||||||||||||| ||||||
Sbjct: 616 tgagaagtgagggcaagtggggaaaaaa-aaacccaagacccttcttccctggcctttta 674
Query: 479 catgagctgccacaagaagagatgaccaa 507
||||||||||||||||||| |||||||||
Sbjct: 675 catgagctgccacaagaagggatgaccaa 703
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 902
Length adjustment: 10
Effective length of query: 497
Effective length of database: 892
Effective search space: 443324
Effective search space used: 443324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
