NTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTGCAATTCCGAGAGCACAATGAGGTAAATCATAGAGGACAAAAA
CATAAAACATAGCTACATACAATCAGCCAGACCAAGAAAAGAAACCATCC
CGGAGCTTTGGCCACTTAACCTCCCTTTACTTTCCACTTCTGGGCTGTAA
AATTCTCTTTAAGCGCCCTTGACTTTGCTTCAAGAAGACAGGCTTAAGAT
GCAGGGAGTGGACAAAGGTCTCCAGCTGTTTCTAGCTGGTACATCTGGTT
TAAACTCAGACACAGGCTACTTAGCTGTGGTTTCTTTTGGAAGCCAGAAT
TGTCCCTGACAAGTGAAAAGCTCCCTCTCCAAGGGTCCTGCTCATTATGA
ACTCCTTGGGCCTTGTGTGGTGCTCCCTTCCAGAAGGACCCTCCTCACTA
TGGGCTCCTTGGACCTGTATGGTGCTCCCTCCCAGGATGGCTTGCTCTCT
ATGGTCTCTTTGGGCTTCTGTGGTGCCCCCTCCCAGGGAGGCCTGTTCTC
TATGGCCTCCTAGCCTGGAATGGTAGAGTAGTGTTTCTGCCTCCCTCTTA
TGAATCTGTCTTGCTCTTGGTGCAATTTTTTTCCATAGTAAGCTAAAATA
ATTATGCTCTGAATTAAAAATAAGCGTGCTACCCCCACAGGTAAATACCT
TCCTTGAAAAGGAAAATAGCGGGGCCTATTTTAATAGATAATTGGCTGGA
CAAGAAATGAAATCCCCCCCACAGGN

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTATATGGCCCTTGAAGCAGTTATGA
GGAGCCCATCTTGCTTTGGGTGTCAAAGAGACTGACTAAGTGTGCAGCCT
CTGTTTCTATTTGGACATCACAGTAGCAAGGGGACATTTTCTCCTTTTTA
ATGCTTATTTATCCACGTCATCTTTGAGCTCTGTATCTCTTAAGTTGTGC
TTCCTCGAGAAACAGACCTCTGTCAATGTGTTCAGATCACTTTTGTTTTG
TTTTGTTTTTTAAAGATTTATTTATTTTTATATGAGTACACTGTAGCTGT
CTTCAGACACACACCAGAAGAGGGCATCAGATCCCATTACAGATGGTTGT
GAGTCACCATGTGGCTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCA
GCCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCTCTCAGATGGCTTTT
TATCTTGTGGTGAAAGTAACTATAAGCTCTTCTGCGACACAGTTTTCCCT
GAGAGCAGAGGTAGACCTTATTATCATCTCTGAGCTAAACTCTAACCCTT
TGTGTTTAGTTTAAATCTGTGCACAGAGGTGCTTTAAAGCTGGCAGGTGG
ATTCTCTTAAAAACTGGCGAAGTACCGGATTTTATTCTTCCTTGGTGGGC
TGAGTTCTTTTCTTTTACTGTTTTTTTAAACACTGTACTTTTTTGTTTTT
GTCTTTTTAAACTTCTC

Query= MSMg01no441_n16.b1 MSMg01no441_n16.b1 CHROMAT_FILE:
MSMg01no441_n16.b1 PHD_FILE: MSMg01no441_n16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:48 2005
         (528 letters)



>mm_chr8_18385636_18386563
          Length = 928

 Score =  977 bits (505), Expect = 0.0
 Identities = 520/525 (99%), Gaps = 2/525 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgcaattcc-gagagcacaatgaggtaaatcatagaggacaaaaacataaaaca 63
           ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgcaa-tcctgagagcacaatgaggtaaatcatagaggacaaaaacataaaaca 263

                                                                       
Query: 64  tagctacatacaatcagccagaccaagaaaagaaaccatcccggagctttggccacttaa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tagctacatacaatcagccagaccaagaaaagaaaccatcccggagctttggccacttaa 323

                                                                       
Query: 124 cctccctttactttccacttctgggctgtaaaattctctttaagcgcccttgactttgct 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cctccctttactttccacttctgggctgtaaaattctctttaagcgcccttgactttgct 383

                                                                       
Query: 184 tcaagaagacaggcttaagatgcagggagtggacaaaggtctccagctgtttctagctgg 243
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 384 tcaagaagacaggcttaagatgcagggagtggacaatggtctccagctgtttctagctgg 443

                                                                       
Query: 244 tacatctggtttaaactcagacacaggctacttagctgtggtttcttttggaagccagaa 303
           |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 444 tacatctggtttaaactcagacacaggctacagagctgtggtttcttttggaagccagaa 503

                                                                       
Query: 304 ttgtccctgacaagtgaaaagctccctctccaagggtcctgctcattatgaactccttgg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttgtccctgacaagtgaaaagctccctctccaagggtcctgctcattatgaactccttgg 563

                                                                       
Query: 364 gccttgtgtggtgctcccttccagaaggaccctcctcactatgggctccttggacctgta 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gccttgtgtggtgctcccttccagaaggaccctcctcactatgggctccttggacctgta 623

                                                                       
Query: 424 tggtgctccctcccaggatggcttgctctctatggtctctttgggcttctgtggtgcccc 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tggtgctccctcccaggatggcttgctctctatggtctctttgggcttctgtggtgcccc 683

                                                        
Query: 484 ctcccagggaggcctgttctctatggcctcctagcctggaatggt 528
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctcccagggaggcctgttctctatggcctcctagcctggaatggt 728


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space:   475524
Effective search space used:   475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)