Query= MSMg01no443_h16.b1 MSMg01no443_h16.b1 CHROMAT_FILE:
MSMg01no443_h16.b1 PHD_FILE: MSMg01no443_h16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:05 2005
(249 letters)
>mm_chr8_115521808_115522456
Length = 649
Score = 447 bits (231), Expect = e-130
Identities = 241/249 (96%), Gaps = 8/249 (3%)
Strand = Plus / Minus
Query: 1 tctgtaatgtcttgaagtaaggaagtaaggaagtactatctggattttctttcattagtt 60
||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tctgtaatgtctt--------gaagtaaggaagtactatctggattttctttcattagtt 288
Query: 61 tatatttcacaatactgttatacagagtttaatatatttatgtgcatacattcatacaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tatatttcacaatactgttatacagagtttaatatatttatgtgcatacattcatacaac 228
Query: 121 agggtgtacatatatacttgtatatgtatatatatacatatacatatatccctttataac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 agggtgtacatatatacttgtatatgtatatatatacatatacatatatccctttataac 168
Query: 181 atttatgtacatacataatatacatatatgtatatgtttattcctttaaaacaccataac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 atttatgtacatacataatatacatatatgtatatgtttattcctttaaaacaccataac 108
Query: 241 atatgtata 249
|||||||||
Sbjct: 107 atatgtata 99
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no443_h16.g1 MSMg01no443_h16.g1 CHROMAT_FILE:
MSMg01no443_h16.g1 PHD_FILE: MSMg01no443_h16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:05 2005
(157 letters)
>mm_chr8_115359986_115360542
Length = 557
Score = 238 bits (123), Expect = 1e-67
Identities = 126/127 (99%)
Strand = Plus / Plus
Query: 1 atgaaaagcattagccattagtggtgcttgcaaattgacatgtagtgccctcatttggca 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 atgaaaagcattagccattagtggtgcttgcaaattgacatgtagtgtcctcatttggca 260
Query: 61 ttgtgctatatccaacatgtgcttacataagatgtacattaaagaatatatatatatata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtgctatatccaacatgtgcttacataagatgtacattaaagaatatatatatatata 320
Query: 121 tatatat 127
|||||||
Sbjct: 321 tatatat 327
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 157
Length of database: 557
Length adjustment: 8
Effective length of query: 149
Effective length of database: 549
Effective search space: 81801
Effective search space used: 81801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
