XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
ATTTTACCAACAGTACAACCTTATGTGATTTCATAAGATATTGAATCAAA
AGTGGTACAAGGTCAATAAGTTAACATGAATCAAGTGAAGGGAGATATGT
CCATTCCAATATGTGATAAAAAAGATTGTCTTTACAGAACAGAAAAACAC
TAGACTGAGTAGTGATATATATCATTGTTGATAAACTGATCAGTTATTGT
AACAGACGTAGTTATCTTTGATTTCAATGAACCAAGAACACAGTAGTAAA
ATTTGTGTATTTAAAACTGATCAAATTGAGAAGAGAAATGGAAAAACCAT
ACAGTTCTACTTGGGCACCTTAACATTTTTCTGTAATTAGTTGATGAGTA
GAAAAAAAATCAGCAAGCATAATATTTAATACTACGATAGTGTCTGGTTT
ATAGACATGGACCTCTTTATTTAACAAGACTGAATATGTATTATCTTCCA
GTTTGTACATCAGAGATACCAATACTGACAATATGATAAAAAAACAAGCT
TGGTAACAGAAAATTCTTCAAGAAATTAAAAATACTTACAATCAAATAGA
ATAGAATTAATAACATCCAATACAATATACTTGGAAATCACTTACCGAAA
TGTAACAGAAAAATCTTCAAACATTTGGAAAAGAACCACAGTCTTTGAAA
AATTCATGGTTTCAAGAGGTAAATTTCCCGGCAN

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAATCATTCTCTACGAAACAGCAGAGGCAG
AAATGGTCAATCATGACAGTACATGGAATTCTGGACACTGTTGTTTTTGT
TTCACCTTGATGGATGACTTGCATCTATATAGATGTTGAAACCATCCCTG
GGGGAATCACATAAAGCTGACTTAGTGATCATCCTATGTGGTAGTTAATC
TTGGTTGTCAAGTTTCTTGGACTGGAATCAACTAAGAGGTATCCCTCTGG
GGGTATCAGTGAGGATATTTTCAGTGAGGAAAAGCTGAAATGAAAAGACC
CTTCCCTAACGTATGTAGAAGCTTCTGGTGTTGACCAAGAGATACAGAGG
TATAAATGGAAATCAGTTCTGCTTGCTGGATTGCCTTTGTTTCTTGTAAG
TGAGTGAATGGACCCTGTTGTTATTGTTGTTGTTGCTGCTGCTGCAACAT
ATTTTTCTGACATTACTCTCCAGTGTCTTCAAATTCCAACATGAACTTGA
AGGGCCACAGGAATGTTCTAGATCTTTGACACTACACTGGGAAATCCAAG
GTATCTATCCTGGCTTTGTGGGATGAATAACTTTCTGGGGATCTTGGCCC
CTAACATGTACAAAAAGCCCACTGGGTGGGAATATTCCACCTCCTATTGG
AGCATAAACCCCTCTTTGCATAATACAATACCATACACCTCTCCCTTTAT
TCTAT

Query= MSMg01no445_p17.b1 MSMg01no445_p17.b1 CHROMAT_FILE:
MSMg01no445_p17.b1 PHD_FILE: MSMg01no445_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:22 2005
         (530 letters)



>mm_chr8_99744474_99745403
          Length = 930

 Score =  975 bits (504), Expect = 0.0
 Identities = 522/528 (98%)
 Strand = Plus / Plus

                                                                       
Query: 3   tacaaccttatgtgatttcataagatattgaatcaaaagtggtacaaggtcaataagtta 62
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tacagccttatgtgatttcataagatattgaatcaaaagtggtacaaggtcaataagtta 262

                                                                       
Query: 63  acatgaatcaagtgaagggagatatgtccattccaatatgtgataaaaaagattgtcttt 122
           ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 263 acatgaatcaagtgaagggagatatgtccattccaatatgtcataaaaaagattatcttt 322

                                                                       
Query: 123 acagaacagaaaaacactagactgagtagtgatatatatcattgttgataaactgatcag 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 acagaacagaaaaacactagactgagtagtgatatatatcattgttgataaactgatcag 382

                                                                       
Query: 183 ttattgtaacagacgtagttatctttgatttcaatgaaccaagaacacagtagtaaaatt 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttattgtaacagacgtagttatctttgatttcaatgaaccaagaacacagtagtaaaatt 442

                                                                       
Query: 243 tgtgtatttaaaactgatcaaattgagaagagaaatggaaaaaccatacagttctacttg 302
           |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgtgaagttaaaactgatcaaattgagaagagaaatggaaaaaccatacagttctacttg 502

                                                                       
Query: 303 ggcaccttaacatttttctgtaattagttgatgagtagaaaaaaaatcagcaagcataat 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggcaccttaacatttttctgtaattagttgatgagtagaaaaaaaatcagcaagcataat 562

                                                                       
Query: 363 atttaatactacgatagtgtctggtttatagacatggacctctttatttaacaagactga 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atttaatactacgatagtgtctggtttatagacatggacctctttatttaacaagactga 622

                                                                       
Query: 423 atatgtattatcttccagtttgtacatcagagataccaatactgacaatatgataaaaaa 482
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 623 atatgtattatcttccagtttgtacatcagagataccaatactgacagtatgataaaaaa 682

                                                           
Query: 483 acaagcttggtaacagaaaattcttcaagaaattaaaaatacttacaa 530
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 acaagcttggtaacagaaaattcttcaagaaattaaaaatacttacaa 730


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space:   478400
Effective search space used:   478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no445_p17.g1 MSMg01no445_p17.g1 CHROMAT_FILE:
MSMg01no445_p17.g1 PHD_FILE: MSMg01no445_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:23 2005
         (455 letters)



>mm_chr8_99862270_99863124
          Length = 855

 Score =  690 bits (357), Expect = 0.0
 Identities = 363/365 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatcattctctacgaaacagcagaggcagaaatggtcaatcatgacagtacatggaattc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 aatcattctctacgaaacagcagaggcagaaatggtcaatcatgacagtacatggaattc 306

                                                                       
Query: 61  tggacactgttgtttttgtttcaccttgatggatgacttgcatctatatagatgttgaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tggacactgttgtttttgtttcaccttgatggatgacttgcatctatatagatgttgaaa 246

                                                                       
Query: 121 ccatccctgggggaatcacataaagctgacttagtgatcatcctatgtggtagttaatct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ccatccctgggggaatcacataaagctgacttagtgatcatcctatgtggtagttaatct 186

                                                                       
Query: 181 tggttgtcaagtttcttggactggaatcaactaagaggtatccctctgggggtatcagtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tggttgtcaagtttcttggactggaatcaactaagaggtatccctctgggggtatcagtg 126

                                                                       
Query: 241 aggatattttcagtgaggaaaagctgaaatgaaaagacccttccctaacgtatgtagaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 aggatattttcagtgaggaaaagctgaaatgaaaagacccttccctaacgtatgtagaag 66

                                                                       
Query: 301 cttctggtgttgaccaagagatacagaggtataaatggaaatcagttctgcttgctggat 360
           ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 65  cttctggtgttgaccaagagatacagaggtataaacggaaatcagtgctgcttgctggat 6

                
Query: 361 tgcct 365
           |||||
Sbjct: 5   tgcct 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space:   376025
Effective search space used:   376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)