NNNNAAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTCACCTTTACGAAACCAAATGGCAGAGAAGCACCTGA
AAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACC
CTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCATG
TGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATT
GTTGGTGGGAGTGCAGGCTTGTACAACCATTCTGGAAATCAGTCTGGCGG
TTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCT
CCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCT
CCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAA
CCTAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTA
CACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCC
TAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACAT
TCACAAAGAAACTCACACAGTATGTACTCACTGATAAGTGGATATTAGCC
CCAAACCTAGGATACCCAAGATATAAGATATAATTTGCTAAACACTTGAA
ACTCACGAAGAATGAAGACTGAAGTGTGGACACTATGCN

CCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAAATAGGGACCACATACATCATA
TTTAAACAAAACTGTTTATTGTTCTGAATTCAGGAGAAAAAAATGAAACC
TGAGGGTTTGTTTAAATTTGGTGGGAAAATTGTCAACTTAGTTAATGCAT
TTTGCTTACACCACCCATAAAACAAAGGTTCCAAAAAGAAAGTCTGGTCT
GTCCTGGTAGCTTAACAAGGGTCTTCTCTGCTCATCCATGCCCCATCTTC
TTTAACTGTGTTTTATAGCCACACATCTAAAGCACAACTCTTCATATCAC
AAGAGTTAAGGCTTCTTTGTCTGTGCCTGTTTTGTGCTATTAGAAAATAT
GTCAGGTTCATCTACAAAGCCCAGTCATTTACTCCTACACATCTCTAGAG
TCTCTCATGCCAAGCTCAAGGTTCTGACATTTGGTGTGTATTTTCTTGAT
ACCTCTTGACACAGCAGAAGGGCAAGAGAAAGCAAATCCCTTGTCCTTAC
AAAGCAGAGGAGGTGGCCAGGGTGAATCCATTTTGAACTGCTTTTTTTTT
TTTTAAATAACAACCTTAATCCCTTCATGANGGTAGAGCCCTCATGACCT
AACTATCTTTGTAAAATGCCACTTCCCCATGCTTTAATGATAAATTTTGT
AAGGCTTAAACCCCCTTCCCGAAAAAAATTCCCGGCCCTCCCCTCTAAAT
TTTCTTTGATTTGTAAAATATAGCCC

Query= MSMg01no447_h12.g1 MSMg01no447_h12.g1 CHROMAT_FILE:
MSMg01no447_h12.g1 PHD_FILE: MSMg01no447_h12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:23 2005
         (472 letters)



>mm_chr8_100387328_100388203
          Length = 876

 Score =  862 bits (446), Expect = 0.0
 Identities = 467/476 (98%), Gaps = 4/476 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaatagggaccacatacatcatatttaaacaaaactgtttattgttctgaattcaggaga 60
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatagggaccacatacattatatttaaacaaaactgtttattgttctgaattcaggaga 260

                                                                       
Query: 61  aaaaaatgaaacctgagggtttgtttaaatttggtgggaaaattgtcaacttagttaatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaaatgaaacctgagggtttgtttaaatttggtgggaaaattgtcaacttagttaatg 320

                                                                       
Query: 121 cattttgcttacaccacccataaaacaaaggttccaaaaagaaagtctggtctgtcctgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cattttgcttacaccacccataaaacaaaggttccaaaaagaaagtctggtctgtcctgg 380

                                                                       
Query: 181 tagcttaacaagggtcttctctgctcatccatgccccatcttctttaactgtgttttata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 tagcttaacaagggtcttctctgctcatccatgccccatcttctttaactgtgttttgta 440

                                                                       
Query: 241 gccacacatctaaagcacaactcttcatatcacaagagttaaggcttctt----tgtctg 296
           ||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||
Sbjct: 441 gccacacatctaaagcacaactcttcatatcacaagagttaaggcttcttcgtttgtctg 500

                                                                       
Query: 297 tgcctgttttgtgctattagaaaatatgtcaggttcatctacaaagcccagtcatttact 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgcctgttttgtgctattagaaaatatgtcaggttcatctacaaagcccagtcatttact 560

                                                                       
Query: 357 cctacacatctctagagtctctcatgccaagctcaaggttctgacatttggtgtgtattt 416
           ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccttcacgtctctagagtctctcatgccaagctcaaggttctgacatttggtgtgtattt 620

                                                                   
Query: 417 tcttgatacctcttgacacagcagaagggcaagagaaagcaaatcccttgtcctta 472
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 621 tcttgatacctcttgacacagcagaagggcaagagaaagcaaatccattgtcctta 676


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 876
Length adjustment: 10
Effective length of query: 462
Effective length of database: 866
Effective search space:   400092
Effective search space used:   400092
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)