Query= MSMg01no448_c16.b1 MSMg01no448_c16.b1 CHROMAT_FILE:
MSMg01no448_c16.b1 PHD_FILE: MSMg01no448_c16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:20 2005
(249 letters)
>mm_chr8_27395266_27395914
Length = 649
Score = 458 bits (237), Expect = e-133
Identities = 246/249 (98%)
Strand = Plus / Minus
Query: 1 tctgttacaggataaattgcatttaaaatttgcaatgtgcattcacttctgtctctgcgt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 449 tctgttacaggataaattgcatttaaaatttgcaatgtgcattcacttctgtctctgcat 390
Query: 61 ttgcctctttttactgcaggattcttgacaaaatccagactctccctgataattattctc 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 389 ttgcctctttttactgcaggattcttgacaaaatccaggctctccctgataattattctc 330
Query: 121 tcgttcatctcttttcagtaacagaaattctattttattttcccaactgaagtgggttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tcgttcatctcttttcagtaacagaaattctattttattttcccaactgaagtgggttca 270
Query: 181 ctttttccatggtcattttctacgtatgttaactggtctaccccctatacctatactttc 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 269 ctttttccatggtcattttctacgtatgttaattggtctaccccctatacctatactttc 210
Query: 241 catctcgtg 249
|||||||||
Sbjct: 209 catctcgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no448_c16.g1 MSMg01no448_c16.g1 CHROMAT_FILE:
MSMg01no448_c16.g1 PHD_FILE: MSMg01no448_c16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:20 2005
(450 letters)
>mm_chr7_111961257_111962106
Length = 850
Score = 576 bits (298), Expect = e-169
Identities = 415/454 (91%), Gaps = 8/454 (1%)
Strand = Plus / Minus
Query: 1 tctggagtcaggttttcataacacagtt-ttccttccctggaacag-tttcggtgcttct 58
|||| ||||||| |||||||||||| || ||||||| | ||| ||| |||| |||||||
Sbjct: 650 tctgtagtcaggctttcataacaca-ttattccttcacgggagcagttttc-atgcttct 593
Query: 59 aagctaaagctccaggaagaacactcgtcacagcctttatcaatctcgagggtatacttg 118
|||||||||||| |||||||||| | ||||||||||||||||| |||||| |||||||||
Sbjct: 592 aagctaaagctctaggaagaacatttgtcacagcctttatcaaactcgagtgtatacttg 533
Query: 119 caaatgaagttaagagtggcatgcaccatagaaaactgtggccactcatcaccaacttgg 178
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 caaatgaag-taagagtggcatgcaccatagaaaactgtggccactcatcaccaacttgg 474
Query: 179 gaagctattgagtaggggagctcgttgccagcctgggaaaacattttccaccttttaaaa 238
||||||||||||||||||| || ||||||||||||||||||||||| | ||||||||||
Sbjct: 473 gaagctattgagtaggggaacttgttgccagcctgggaaaacatttgctgccttttaaaa 414
Query: 239 atgttatgttgactatagctatggtttactgaaatgattttattttctgtgcatgtgctc 298
||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 413 atgcaatgtggactatagctatgatttactgaaatgattttattttctgtgcatgtgttc 354
Query: 299 tgctgcaaatgtcatc-cttctgtaatatttggacttactctaata-tctgagaagaggt 356
| || || |||||| | ||| |||||||||| |||||||||||||| |||||||||||||
Sbjct: 353 tacttcagatgtca-cacttgtgtaatatttagacttactctaatactctgagaagaggt 295
Query: 357 gtactgtacaaaattttgtaacatacaaaaccactgtatggctaaagtcttactgagcca 416
||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||
Sbjct: 294 gtactgtacaaaattttgtaacatacaaaaccactatttggctaaagtcttactgaacca 235
Query: 417 aaaagggaacacagcggtatctccgaattttaca 450
|||||||||||||| |||||||| ||||||||||
Sbjct: 234 aaaagggaacacagtggtatctcagaattttaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
