Query= MSMg01no448_f21.b1 MSMg01no448_f21.b1 CHROMAT_FILE:
MSMg01no448_f21.b1 PHD_FILE: MSMg01no448_f21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:37 2005
(542 letters)
>mm_chr8_67348036_67348977
Length = 942
Score = 982 bits (508), Expect = 0.0
Identities = 532/542 (98%), Gaps = 4/542 (0%)
Strand = Plus / Plus
Query: 1 acaaagtctaccatcggcacaggggatgaaaacgctcggcactccacgaatggcagggct 60
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 201 acaaagtctaccatcggcacaggggatgaaaacactctgcactccacgaatggcagggct 260
Query: 61 cacaagtcagccagcatgacaagggtggggaattggggaagaccttctcctgcatggccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacaagtcagccagcatgacaagggtggggaattggggaagaccttctcctgcatggccc 320
Query: 121 acttcagtcagcaaggtacgtattgtttagatcccctgaaatgtacatttggagaaacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttcagtcagcaaggtacgtattgtttagatcccctgaaatgtacatttggagaaacca 380
Query: 181 aggttaaaagtgaacagcccaggctacgggtgtagctcagtgatgaaagactacctagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggttaaaagtgaacagcccaggctacgggtgtagctcagtgatgaaagactacctagta 440
Query: 241 tgtatgatatctaggggtctatcctcaaccccacacacatagggctaacctgcctacacc 300
||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 tgtatgagatctaggggtctatcctcaaccccacatacatagggctaacctgcctacacc 500
Query: 301 actcatccccagtaatgacagcaatactcaaaccccattacacaatcgcctaagcagggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actcatccccagtaatgacagcaatactcaaaccccattacacaatcgcctaagcagggt 560
Query: 361 aataacaaatcttaaagctcataccaaacaaactggttttgaactcttacatagtccagg 420
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatgacaaatcttaaagctcataccaaacaaactggttttgaactcttacatagtccagg 620
Query: 421 ctggaaccaaaatcactacatagccccatttggccttgaattcgtaatgaccgtgctttg 480
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 621 ctggaaccaaaatcactacatagccccatttggccttaaattcgtaatgaccgtgctttg 680
Query: 481 gcttcccaagtcctggggtgggttatagatgcacaccactacaccccagtgaagaaatta 540
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcttcccaagtcctggggt----tatagatgcacaccactacaccccagtgaagaaatta 736
Query: 541 gt 542
||
Sbjct: 737 gt 738
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space: 495824
Effective search space used: 495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_f21.g1 MSMg01no448_f21.g1 CHROMAT_FILE:
MSMg01no448_f21.g1 PHD_FILE: MSMg01no448_f21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:37 2005
(133 letters)
>mm_chr8_67512276_67512808
Length = 533
Score = 250 bits (129), Expect = 3e-71
Identities = 129/129 (100%)
Strand = Plus / Minus
Query: 1 tgttactctatggaatttgctcagatctttaagtgccttggaaatgttcaggatctctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tgttactctatggaatttgctcagatctttaagtgccttggaaatgttcaggatctctgc 270
Query: 61 agactgtcaatgctgtctgcttctgccagctgccttgctgcctttttggaagagaggtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 agactgtcaatgctgtctgcttctgccagctgccttgctgcctttttggaagagaggtct 210
Query: 121 ccctccttc 129
|||||||||
Sbjct: 209 ccctccttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 133
Length of database: 533
Length adjustment: 8
Effective length of query: 125
Effective length of database: 525
Effective search space: 65625
Effective search space used: 65625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
