NNGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCAAGAATTTACTTAAAATATATCTCTGACATTATAGTGCAGT
AAAGGTTCATCTACATATATTCATCCAAGGTTAGCTTGCAATTTATGCTA
ATTATTATAGAATACTAGGTTCTTCAATAACCTTGTTAAAATGCCTAAAA
TTTGAAAACTATTTTAAAATTAAAGCTCGCTTATTTAAAATATTACACAT
TTGCTGACATATTTATAAACATTTCACTTAGAAAGATTTATTGTTCCTAT
TATGCCAGTCTAAATAAGTTTATAAGATGCCTATATAATTTAACTGTTAT
GTAATAAGACTTTTTTCTTTCAAGGTGTAATTTACCAAGCGGCATAAGAC
ATGCTGAATCCCAACATCACTTAGAAATGTATCCTCCAGGGTAGTCATGT
TTCTGTTTTCTCTGATGCTTTCTGTTTTCTTTTAAATGTACTTGCAGTGA
TGAGTTTGTAATTTGAAACAAATTTTGTTTCAACAGTTAGACATGAATTT
GCCCCAATTCCACAGACTAGACTGAGAAAATGAAGATGATTAAAAAAAAA
AAAAACAAAATACAAACAAACAAAACAAAACACCCAAAACAGGCAAGCAA
GCAAACAAAATCTTTGCAAAACTAGACTATTCCTTTTGAGAGAGGATTTT
TTTTTGCTATCACTAATTTGTAAGTACTTTTTCAGAAATGAAA

NNAACCATGAAGTGGTAGCCTGGGGGCGCCTGGTTCCGAACCTGAGGNGA
ACNANAGAAGGTTCCCAGACATACGAGAAAACCAGAGACACGGAAACNAA
NAGAGGAGAAAGGGGTTATACCCCCAGAAGANANGGGCACAGGGGAAAAA
NCCGGAACAGAACAGCAAGGGCGGGGGCTGNAAGAACGAGAANNGACAAA
GGGGACCCAAGGAAACNCCAAAGNNCCTGCAAGGCAAAAGACACCGTCAA
TTTTACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTA
AATCAGATAGGGGACTAATTTTTTTTATANANAAAGAACNCAAGAAGGGG
GACNNCAGAAAATCAAACACCCCCANTAAAAAAGGGGGCTCAGAACTGAA
CAAAGAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAA
AATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTG
AGATTCCACCTCACACTAGTCAGAATGGCTAAGATCAAAAATTCAGGTGA
CAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTT
GGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCCGTTC
CTCAGATTATTGTTTTTGTACTACCGGGAGGATCCAGCAATACCTCTCCC
GGGCATATATCCCGAAAAAGGCCCCAACTGGGAA

Query= MSMg01no449_j12.b1 MSMg01no449_j12.b1 CHROMAT_FILE:
MSMg01no449_j12.b1 PHD_FILE: MSMg01no449_j12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:15 2005
         (559 letters)



>mm_chr8_51577254_51578212
          Length = 959

 Score = 1015 bits (525), Expect = 0.0
 Identities = 550/559 (98%), Gaps = 5/559 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaagaatttac-ttaaaatatatctctgacattatagtgcagtaaaggttcatct 63
           ||||||||||| | || ||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 754 gaattcaagaa-tgacattaaaatgtatctctgacattatagggcagtaaaggttcatct 696

                                                                       
Query: 64  acatatattcatccaaggttagcttgcaatttatgctaattattatagaatactaggttc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 acatatattcatccaaggttagcttgcaatttatgctaattattatagaatactaggttc 636

                                                                       
Query: 124 ttcaataaccttgttaaaatgcctaaaatttgaaaactattttaaaattaaagctcgctt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 ttcaataaccttgttaaaatgcctaaaatttgaaaactattttaaaattaaagctcgctt 576

                                                                       
Query: 184 atttaaaatattacacatttgctgacatatttataaacatttcacttagaaagatttatt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 atttaaaatattacacatttgctgacatatttataaacatttcacttagaaagatttatt 516

                                                                       
Query: 244 gttcctattatgccagtctaaataagtttataagatgcctatataatttaactgttatgt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gttcctattatgccagtctaaataagtttataagatgcctatataatttaactgttatgt 456

                                                                       
Query: 304 aataagacttttttctttcaaggtgtaatttaccaagcggcataagacatgctgaatccc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aataagacttttttctttcaaggtgtaatttaccaagcggcataagacatgctgaatccc 396

                                                                       
Query: 364 aacatcacttagaaatgtatcctccagggtagtcatgtttctgttttctctgatgctttc 423
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aacatcactcagaaatgtatcctccagggtagtcatgtttctgttttctctgatgctttc 336

                                                                       
Query: 424 tgttttcttttaaatgtacttgcagtgatgagtttgtaatttgaaacaaattttgtttca 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgttttcttttaaatgtacttgcagtgatgagtttgtaatttgaaacaaattttgtttca 276

                                                                       
Query: 484 acagttagacatgaatttgccccaattccacagactagactgagaaaatgaagatgatt- 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 275 acagttagacatgaatttgccccaattccacagactagactgagaaaatgaagatgattt 216

                              
Query: 543 aaaaaaaaaaa--aaacaa 559
           |||||||||||  ||||||
Sbjct: 215 aaaaaaaaaaacaaaacaa 197


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space:   521001
Effective search space used:   521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)