Query= MSMg01no450_b19.b1 MSMg01no450_b19.b1 CHROMAT_FILE:
MSMg01no450_b19.b1 PHD_FILE: MSMg01no450_b19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:55 2005
(580 letters)
>mm_chr8_110563335_110564314
Length = 980
Score = 1029 bits (532), Expect = 0.0
Identities = 568/582 (97%), Gaps = 5/582 (0%)
Strand = Plus / Plus
Query: 1 tttcttacttatagactggtgatgatgtggcgttaagagacatccttaagagacaaagta 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 tttcttacttatagactggtgatgatgtggcgttaagagatatccttaagagacaaagta 260
Query: 61 cagtatactaagggctccatggtatagctgcttaccaattgtcagtcttcattatcattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 cagtatactaagggctccatggtatagctgcttaccaattgtcagtcttcattattattc 320
Query: 121 acagggatgctgtctacgagcagaaacaaatacagatagttgtgctacatagaggtaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagggatgctgtctacgagcagaaacaaatacagatagttgtgctacatagaggtaact 380
Query: 181 cagttttgccaggaagcccattggtgcggagagtgtcaaggaacagggatcctgcacata 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagctttgccaggaagcccattggtgcggagagtgtcaaggaacagggatcctgcacata 440
Query: 241 gcaggaaggtttgttgtgacagaggttctagagagatgatggctcagcagttaagagtgc 300
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 441 gcaggaaggacagttgtgacagaggttctagagagatg---gctcagcagttaagagtgc 497
Query: 301 atactgctcttgcagagaacctttgttgagttcccggttcccacatctgctcaccatctc 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 498 atactgctcttgcagagaacctttgttgagttcctggttcccacatctgctcaccatctc 557
Query: 361 ctgtaactccagctgctgaagacccgatgctgccttctagcctctggtagccaatgtgct 420
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 558 ctgtaactccagctgctgaagacccgatgccgccttctagcctctggtagccaatgtgct 617
Query: 421 cacaaattatcacatgggatacatgtgatacaaaccctcccagataaacgcgcttaccta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 cacaaattatcacatgggatacatgtgatacaaaccctcccagataaacgcgcttaccta 677
Query: 481 taatttaaaaaaaaaa--caaagtcaagtcttacaaaaagcaacccattgcagccccgtt 538
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 678 taatttaaaaaaaaaaaacaaagtcaagtcttaaaaaaagcaacccattgcagccccgtt 737
Query: 539 gcagcggttaagatcaacttgtctgaggatgtaagctgcggc 580
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gcagcggttaagatcaacttgtctgaggatgtaagctgcggc 779
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no450_b19.g1 MSMg01no450_b19.g1 CHROMAT_FILE:
MSMg01no450_b19.g1 PHD_FILE: MSMg01no450_b19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:55 2005
(428 letters)
>mm_chr8_110766788_110767615
Length = 828
Score = 787 bits (407), Expect = 0.0
Identities = 422/429 (98%), Gaps = 6/429 (1%)
Strand = Plus / Minus
Query: 1 ctctaaatccttagctgctacgcggctgtactccccctttgaaggcaagcgctggaccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctctaaatccttagctgctacgcggctgtactccccctttgaaggcaagcgctggaccta 501
Query: 61 ataaaccaaatactagagtcacagaccccggattcttcagttcttggcatagcttttcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ataaaccaaatactagagtcacagaccccggattcttcagttcttggcatagcttttcat 441
Query: 121 gaaattcaaaagggtgcttttgtgcttaactgagttttcatttcattgcttttaaatttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gaaattcaaaagggtgcttttgtgcttaactgagttttcatttcattgcttttaaatttg 381
Query: 181 ttaagcttgacttttgacactttagaactaattctttttaatattttcagtgcagttaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttaagcttgacttttgacactttagaactaattctttttaatattttcagtgcagttaca 321
Query: 241 tagtaaatatttgtactccctggaaggaagatattgatctgttattaatgtcagtttgta 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tagtaaataattgtactccctggaaggaagatattgatctgttattaatgtcagtttgta 261
Query: 301 aaaaccaaaatgttctccga-ttttttgtttttgtttttttttgggggggggcttttccc 359
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 260 aaaaccaaaatgttctccgatttttttgtttttgttttttttt-ggggggggcttttccc 202
Query: 360 ctctttctttctttctttctttctttctctctttctttcattctttctctctttctcttt 419
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 ctctttctttctttctttctttct----ctctttctttcattctttctctctttctcttt 146
Query: 420 ttcagtcag 428
|||||||||
Sbjct: 145 ttcagtcag 137
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
