NNNGGGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTTCTGAAGAGGGGAATGATGGATTGTAAGAGCCAAAAG
CATCAAGGATCCCATAAGAAAACCAACAGAATCAAAAATCCTCGACTCAT
AGGAACTCAGTGAAACTCAATCAACAATGAGAGAAACTTGATGGGTCTAA
CCTGAGACTTCTGTGTTATATTTGTGTTGTTTGGTATTTTGTGGGACTTT
TAACAGGAGCAGAGAAGTTTCTGGGGATTTTTTAACTGCTTCTGGGACCC
TTGCTCTTCTACTTGGTTGCCTTATGCAGCCTTAATATGAATAGAGCTTC
CCAATCTTTTTGGAACTTGGTATACCATGATTAGTTGACATCCCTGGGAG
GGCTGCCCTTTTCTGAAGGGAAATGGAGGAAGAATAGATTGAGAGGGAAG
GGGTGGGAACCTGGGAAGAGAAGAGAAAGGAGAAACAATGAGACAATAAA
TTAATAAAAAATATTTTAAAAACAGAAGCAAAAATATTTAAAAACTCTGA
GCTGTATATACAGTGAATGATATAGTACGGTTATTGAATATTACAGAATA
TAATTGTTAAGGTTAGGCCTGTTGCTATGTATTTTAATGTGTCCCCACCC
TCATACCCCAAGACATGGCTGTCCCAGAGACTAGAGAGTCCACACATAGT
TGCAAGTGATGCTATGTGACCTTACCCCTGCCCCAAGTTA

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAATCCACTACTGAGTCATCTCCTTTC
TCCCATATGTTTTATTTATTAAGATATATATCCCTGAAATGAACTNCTAT
ATGTTTGTAGCTAAACTATCTGGNNCATTAAATTTGAAGGACAAAAGTAA
GTTTCTTAAACTGACTTATTTTTAAAATAAAGCCAAAAAAGCAACATTTT
TCTTTGAAAAAATTTCAAAAAGGCCGCCTAATGCCCCTTTCCCCCAATTG
GGATTAATTTAAGGGGGAGGCTTTGTTTTTTTCCCTATAAGCCCAATTTT
TTTTTTTTAAAAAACCCCTCCAAATCTTTTTTTTTTTTAAACACAAAGGT
TATGTGTGGTTTAAAAAACGGGGTTTTTTTAAAAAAACCTCTTTTTTTTC
CGGGGGATTAAAAAAACCCGTTTGTTTTTTTNTTTCCCTCTTTTCTCCCC
CCCCCAAAAAAAAAACACCCCTTTTTATTTCCCCCCCAACAACAAAATAT
TTTTTAAATCCCCCGAAAAAAAAAAAACCCACCCTCTTTTTTNNTCACAA
ATTCTATTTAAAAAAAAAAAACCCCCCCCCCCCACAAAAATTTNGGGGTG
TCTTTTTTTTGTGTGGTGGACACTCGTCCCTCATCTCTTTTTTTTTCTTC
NTTACAAAAAAAAAAAAATATTTTTTTTTTTATTCCTCTTTTTAGTTGTG
GGGGGAGGGGGTGTG

Query= MSMg01no451_g02.b1 MSMg01no451_g02.b1 CHROMAT_FILE:
MSMg01no451_g02.b1 PHD_FILE: MSMg01no451_g02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:36 2005
         (616 letters)



>mm_chr8_103447479_103448494
          Length = 1016

 Score = 1108 bits (573), Expect = 0.0
 Identities = 603/613 (98%), Gaps = 2/613 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttctgaagaggggaatgatggattgtaagagccaaaagcatcaaggatcccata 64
           |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 205 gaatccttctgaagaggggaatgatggattttaagagccaaaagcatcaaggatcccata 264

                                                                       
Query: 65  agaaaaccaacagaatcaaaaatcctcgactcataggaa-ctcagtgaaactcaatcaac 123
           |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 265 agaaaaccaacagaatcaaaaatcctcgactcatag-aagctcagtgaaactcaatcaac 323

                                                                       
Query: 124 aatgagagaaacttgatgggtctaacctgagacttctgtgttatatttgtgttgtttggt 183
           ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 324 aatgagagaaacttgatgggtctaacctgagccctctgtgttatatttgtgttgtttggt 383

                                                                       
Query: 184 attttgtgggacttttaacaggagcagagaagtttctggggattttttaactgcttctgg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 attttgtgggacttttaacaggagcagagaagtttctggggattttttaactgcttctgg 443

                                                                       
Query: 244 gacccttgctcttctacttggttgccttatgcagccttaatatgaatagagcttcccaat 303
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tacccttgctcttctacttggttgccttatgcagccttaatatgaatagagcttcccaat 503

                                                                       
Query: 304 ctttttggaacttggtataccatgattagttgacatccctgggagggctgcccttttctg 363
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 504 ctttttggaacttggtataccatgattagttgacattcctgggagggctgcccttttctg 563

                                                                       
Query: 364 aagggaaatggaggaagaatagattgagagggaaggggtgggaacctgggaagagaagag 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aagggaaatggaggaagaatagattgagagggaaggggtgggaacctgggaagagaagag 623

                                                                       
Query: 424 aaaggagaaacaatgagacaataaattaataaaaaatattttaaaaacagaagcaaaaat 483
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 624 aaaggagaaacaatgagacaataaattaataaaaaatattttataaacagaagcaaaaat 683

                                                                       
Query: 484 atttaaaaactctgagctgtatatacagtgaatgatatagtacggttattgaatattaca 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 atttaaaaactctgagctgtatatacagtgaatgatatagtacggttattgaatattaca 743

                                                                       
Query: 544 gaatataattgttaaggttaggcctgttgctatgtattttaatgtgtccccaccctcata 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 744 gaatataattgttaaggttaggcctgttgctatgtattttaatgtgtccccacccccata 803

                        
Query: 604 ccccaagacatgg 616
           |||||||||||||
Sbjct: 804 ccccaagacatgg 816


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space:   609636
Effective search space used:   609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)