Query= MSMg01no452_e05.b1 MSMg01no452_e05.b1 CHROMAT_FILE:
MSMg01no452_e05.b1 PHD_FILE: MSMg01no452_e05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:46 2005
(675 letters)
>mm_chr8_115036079_115037153
Length = 1075
Score = 1035 bits (535), Expect = 0.0
Identities = 612/671 (91%), Gaps = 52/671 (7%)
Strand = Plus / Plus
Query: 5 gaattctacaatctgcatggtacaactgaaaacatgctaagcttagggctgcaaggcagc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gaattctacaatctgcatggtacaactgaaaacatgctaagcttagggctgcaaggcagc 316
Query: 65 tcagtggtcaagagccatttctgctgttgtggagaacttggattgtgtttctagcaccca 124
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 317 tcagtggtcaagagccatttctgctcttgtggagaacttggattgtgtttctagcaccca 376
Query: 125 tgttgggcagctcacgactgcctgtgactcatctccagggaatctaatgccctcttctgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tgttgggcagctcacgactgcctgtgactcatctccagggaatctaatgccctcttctgg 436
Query: 185 tgtgcaggcacagaaacacaaaatggaaagttaaaaacatctttgagggccgggcgtggt 244
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 437 tgtgcaggcacagaaacacaaaatggaaagttaaaaacatctttgagggctgggcgtggt 496
Query: 245 ggcacacgcctttaatcccagcactcgggaggcagaggcaggcagatctctgagtttgag 304
| |||||||||
Sbjct: 497 g--------------------------------------------------gagtttgag 506
Query: 305 gccagcctggtctacaaagtgagttccaggacagccagggctatacagagaaaccgtctc 364
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gccagcctggtctacgaagtgagttccaggacagccagggctatacagagaaaccgtctc 566
Query: 365 aaaaaaccaaaaaaaaaaaaaaaaaaaatctttgaaataattgaaatattctgatctcac 424
||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 567 gaaaaacc--aaaaaaaaaaaaaaaacatctttgaaatcattgaaatattctgatctcac 624
Query: 425 ttaaactaagaagtatgagggtaccgtgggaagattagaaagtcccaatacaaccaccat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttaaactaagaagtatgagggtaccgtgggaagattagaaagtcccaatacaaccaccat 684
Query: 485 tgtcaagaacttggtaactgtggtcttgacgattctgattttgtaacctttagagtcatt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgtcaagaacttggtaactgtggtcttgacgattctgattttgtaacctttagagtcatt 744
Query: 545 ctacaattttactacaaggaaaagagggaacatatcaacttttctaaaatccaaatgact 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctacaattttactacaaggaaaagagggaacatatcaacttttctaaaatccaaatgact 804
Query: 605 aattacacatctctctgtgtgattgttgttttttttttcagatacacatcttttgaatgt 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 aattacacatctctctgtgtgattgttgttttttttttcagatacacatcttttgaatgt 864
Query: 665 tggtttataat 675
|| ||||||||
Sbjct: 865 tgttttataat 875
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space: 708225
Effective search space used: 708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_e05.g1 MSMg01no452_e05.g1 CHROMAT_FILE:
MSMg01no452_e05.g1 PHD_FILE: MSMg01no452_e05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:46 2005
(658 letters)
>mm_chr8_115200916_115201973
Length = 1058
Score = 1249 bits (646), Expect = 0.0
Identities = 655/658 (99%)
Strand = Plus / Minus
Query: 1 tatccctgaggtagtgctgtaatttacataagtcaatgatctgctactaggaatcaacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 tatccctgaggtagtgctgtaatttacataagtcaatgatctgctactaggaatcaacat 799
Query: 61 tatgttgctactatttagtttgctctctatataatactatgagttggatgctgtagttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 tatgttgctactatttagtttgctctctatataatactatgagttggatgctgtagttca 739
Query: 121 atgttcaatggttgccctaaatgcctaactgttcaaattaaaaaatatagtattttggga 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 738 atgttcaatggttgccctaaatgcctaactgttcaaatttaaaaatatagtattttggga 679
Query: 181 tgtcaaacattctcatacattccaatcttttagaacacattgtgtcaattttaataaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tgtcaaacattctcatacattccaatcttttagaacacattgtgtcaattttaataaaga 619
Query: 241 caaagatactttgtataattatatgctactgttcctttttataagttgcctatttgtaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 caaagatactttgtataattatatgctactgttcctttttataagttgcctatttgtaac 559
Query: 301 tttgccacttaaaaatagaaaacttaaaaatagaaaattaaaactttatttttgtcacta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tttgccacttaaaaatagaaaacttaaaaatagaaaattaaaactttatttttgtcacta 499
Query: 361 atttttagactatttcatgcctgtgcaataagataaaatcttttattatattatgtgtat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 atttttagactatttcatgcctgtgcaataagataaaatcttttattatattatgtgtat 439
Query: 421 ggacccataagaaaatttcatataataacagaaatgttccatagctgaactgatagacta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 438 ggacccataagaaaatttcatataataacagaaatgttccatagctgaactgagagacta 379
Query: 481 acatagctgttctataatagctatacagagccttaaatgtggctgctgtgagctgatgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 acatagctgttctataatagctatacagagccttaaatgtggctgctgtgagctgatgca 319
Query: 541 acctcactcattaattccttcttggtgattgggattgatcccaggtcctccctcacactt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 acctcactcattaattccttcttggtgattgggattgatcccaggtcctccctcacactt 259
Query: 601 gacacactctattcctctgctatcttctttgctgtattttaaaaatatttacttcata 658
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gacacactctatccctctgctatcttctttgctgtattttaaaaatatttacttcata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
