Query= MSMg01no452_h17.b1 MSMg01no452_h17.b1 CHROMAT_FILE:
MSMg01no452_h17.b1 PHD_FILE: MSMg01no452_h17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:03 2005
(678 letters)
>mm_chr8_68761290_68762367
Length = 1078
Score = 1268 bits (656), Expect = 0.0
Identities = 671/676 (99%), Gaps = 2/676 (0%)
Strand = Plus / Plus
Query: 4 tcattaattatctcaccaaaaattaaaaaatattattaaatttgtattctaaactttaaa 63
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 204 tcattaattatctcaccaaaaattcaaaaatattattaaatttgtattctaaactttaaa 263
Query: 64 tttcaaataccattgcattatgttattttagtacttcgatgtcctgttttatgctgttca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttcaaataccattgcattatgttattttagtacttcgatgtcctgttttatgctgttca 323
Query: 124 attcatcttagaatcttcttgataattctaagatgcttgtctccactgctgcatccaatg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 attcatcttagaatcttcttgataattctaagatgcttgtctccactgctgcatccaatg 383
Query: 184 ctttcatttatcttattaaacacattgaacatatgacttgtcttgcagtgtcagaattca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctttcatttatcttattaaacacattgaacatatgacttgtcttgcagtgtcagaattca 443
Query: 244 aatcctctgcatgccaaattttagctggagttttatttcctgactcacccacagtgcttt 303
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aagcctctgcatgccaaattttagctggagttttatttcctgactcacccacagtgcttt 503
Query: 304 gtttgtttgtgaattttaggttgtgaatttatatatcttggaatgttacctgtggggatt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtttgtttgtgaattttaggttgtgaatttatatatcttggaatgttacctgtggggatt 563
Query: 364 gttttgaaggctgaaagaagatttcatcagagagaattcatatttgtttctgccagtatc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gttttgaaggctgaaagaagatttcatcagagagaattcatatttgtttctgccagtatc 623
Query: 424 ttgggggtactaccagcttgggatcactttaaaataaattctcaacttgaagcattttga 483
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 624 ttgggggtactaccagcttgggatcactttaaaataaattctccacttgaagcattttga 683
Query: 484 tccagctatttaatgtggattcaggctgcctacagttatagattgttaggg-aagagtac 542
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 684 tccagctatttaatgtggattcaggctgcctacagttatagattgttaggggaa-agtac 742
Query: 543 gttctctatcctaagcgtcagcctttgtgaaagacaattttctttatagtcccctgaagg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gttctctatcctaagcgtcagcctttgtgaaagacaattttctttatagtcccctgaagg 802
Query: 603 atatgaaatattttgtttccctcagagcactgacatcacagtcctttactgctgcaggtg 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 atatgaaatattttgtttccctcagagcactgacatcacagtcctttactgctgcaggtg 862
Query: 663 atatatttggctccaa 678
||||||||||||||||
Sbjct: 863 atatatttggctccaa 878
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1078
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1068
Effective search space: 713424
Effective search space used: 713424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_h17.g1 MSMg01no452_h17.g1 CHROMAT_FILE:
MSMg01no452_h17.g1 PHD_FILE: MSMg01no452_h17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:03 2005
(633 letters)
>mm_chr8_68925903_68926935
Length = 1033
Score = 1154 bits (597), Expect = 0.0
Identities = 619/633 (97%), Gaps = 12/633 (1%)
Strand = Plus / Minus
Query: 1 tttgacaaaggcatatgcatgttttggcaaacgatggatactttaaagtagtctgtccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 tttgacaaaggcatatgcatgttttggcaaacgatggatactttaaagtagtctgtccac 916
Query: 61 tctgagtgaatactaagttactaggcattagctcatccatccatccatccatccatccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 tctgagtgaatactaagttactaggcattagctcatccatccatccatccatccatccat 856
Query: 121 ccatccatccatccatccatccatccatccatttccatatttaccttgctaccattcttc 180
|||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 855 ccatccatccatccatccat-------tc-----ccatatttaccttgctaccattcttc 808
Query: 181 tagaacaataaaaactttttgcatgtaaactatatgtaagattttgtaaggtgatgtgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 tagaacaataaaaactttttgcatgtaaactatatgtaagattttgtaaggtgatgtgat 748
Query: 241 aagtactagcatgcatgcatttgagtctttgcattttaggtagggagcttaggctataac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 aagtactagcatgcatgcatttgagtctttgcattttaggtagggagcttaggctataac 688
Query: 301 agtttatgtattgggtaactatacaactatccggaaagtaagttatactgggatatgtaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 agtttatgtattgggtaactatacaactatccggaaagtaagttatactgggatatgtaa 628
Query: 361 tatggaacatgccaaatgctgctgtatttgagtgagaggaaaatcatatatagactggtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tatggaacatgccaaatgctgctgtatttgagtgagaggaaaatcatatatagactggtg 568
Query: 421 aagaaagagagtgcttgaaaactaatgaaagttatggtaaataaaatggggttggagtct 480
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 aaggaagagagtgcttgaaaactaatgaaagttatggtaaataaaatggggttggagtct 508
Query: 481 tcaggagctttggtggggaagatgagtattgttaggctgctctgtggatggcagataact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tcaggagctttggtggggaagatgagtattgttaggctgctctgtggatggcagataact 448
Query: 541 ttagggaatgcttacaaggaagatccataagctcctcaaataacaacgtgtgggcaatta 600
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 447 ttagggaatgcttacaaggaagatccataagctcctcaaataacaacatgtgggcaatta 388
Query: 601 caaaatcaatataagtatataagcaggatcata 633
|||||||||||||||||||||||||||||||||
Sbjct: 387 caaaatcaatataagtatataagcaggatcata 355
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 13
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|