Query= MSMg01no452_m07.b1 MSMg01no452_m07.b1 CHROMAT_FILE:
MSMg01no452_m07.b1 PHD_FILE: MSMg01no452_m07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:26 2005
(633 letters)
>mm_chr8_44018411_44019442
Length = 1032
Score = 1203 bits (622), Expect = 0.0
Identities = 628/630 (99%), Gaps = 1/630 (0%)
Strand = Plus / Minus
Query: 4 ggaattctttcattgtcttttccatggggctcttcctgtgtattaaacaaatgtactaga 63
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 ggaattctttca-ggtcttttccatggggctcttcctgtgtattaaacaaatgtactaga 774
Query: 64 tagcatgtaaaaaaatgcaccttgtataccataagttatattctaaaagacactaaggct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 tagcatgtaaaaaaatgcaccttgtataccataagttatattctaaaagacactaaggct 714
Query: 124 ttaaaaatgtcactaaaagtatctatgacagttcatctttttttttttccttgagttccc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 ttaaaaatgtcactaaaagtatctatgacagttcatctttttttttttccttgagttccc 654
Query: 184 ttagtatgctcattgtttcctgatgaggcttatcctctctcctccctcaaggaaggaatg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ttagtatgctcattgtttcctgatgaggcttatcctctctcctccctcaaggaaggaatg 594
Query: 244 atttcatttggaggaagtagctacacagcagaagcaaagctgaacagaacagtacgagtt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 atttcatttggaggaagtagctacacagcagaagcaaagctgaacagaacagtacgagtt 534
Query: 304 ttagaacaatcagagtaatgatcgatggagaaaacttaaagctattttcctcaaccaagg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ttagaacaatcagagtaatgatcgatggagaaaacttaaagctattttcctcaaccaagg 474
Query: 364 gagtagatgatttttgtttgtttttcctctcaccatcctcaaactcattgtaatattttt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gagtagatgatttttgtttgtttttcctctcaccatcctcaaactcattgtaatattttt 414
Query: 424 ttcctttttcttccatgttaggcttattttcttcattgtgggggctttgttctcttatgt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ttcctttttcttccatgttaggcttattttcttcattgtgggggctttgttctcttatgt 354
Query: 484 gggacaactctcagagacagtttcctcttgatttaacttgatgctctatctcagttcctg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gggacaactctcagagacagtttcctcttgatttaacttgatgctctatctcagttcctg 294
Query: 544 ttgtaaaggccccctttcctagaaggtgagtagaatctttccagaatctatttgcctctc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ttgtaaaggccccctttcctagaaggtgagtagaatctttccagaatctatttgcctctc 234
Query: 604 aggcccccttgtctagctgcttggaatggt 633
||||||||||||||||||||||||||||||
Sbjct: 233 aggcccccttgtctagctgcttggaatggt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1032
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1022
Effective search space: 636706
Effective search space used: 636706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_m07.g1 MSMg01no452_m07.g1 CHROMAT_FILE:
MSMg01no452_m07.g1 PHD_FILE: MSMg01no452_m07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:26 2005
(667 letters)
>mm_chr8_43828872_43829938
Length = 1067
Score = 1290 bits (667), Expect = 0.0
Identities = 667/667 (100%)
Strand = Plus / Plus
Query: 1 ctcttcagacactaaagttgaatatatttcaaaacactcataataaccttatattaaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcttcagacactaaagttgaatatatttcaaaacactcataataaccttatattaaatc 260
Query: 61 tacatatcatccgtatcttattttaaatgcacatgagcatatatatacatatgtgtgtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacatatcatccgtatcttattttaaatgcacatgagcatatatatacatatgtgtgtat 320
Query: 121 acatatttaacactatatttacatacataattaaatgttcccttttttgctcacatagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acatatttaacactatatttacatacataattaaatgttcccttttttgctcacatagac 380
Query: 181 tttagcatgaccaagaaatcaggtaagacttttttttttaacatatttcatttaactgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttagcatgaccaagaaatcaggtaagacttttttttttaacatatttcatttaactgtg 440
Query: 241 gtatgttgggtcttgagatatctatcacctacccaaaatttgtatagaccttaaaaaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtatgttgggtcttgagatatctatcacctacccaaaatttgtatagaccttaaaaaagt 500
Query: 301 taattgccacaaatctttttataaaatctgcttagtaatatgatatcaagaatgaacatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taattgccacaaatctttttataaaatctgcttagtaatatgatatcaagaatgaacatg 560
Query: 361 agaaactattttaacaagccaagttttgtttcccaattttcatcaaaaaaatatcactgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaaactattttaacaagccaagttttgtttcccaattttcatcaaaaaaatatcactgg 620
Query: 421 aatatcttttgttttaattttagtgaggtttgtaattattgggtagcttggatacaagtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatatcttttgttttaattttagtgaggtttgtaattattgggtagcttggatacaagtc 680
Query: 481 atgttcactgaaaaaaaaaagagatcacctgcctcattgtgtgaaagtttcaggttcatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atgttcactgaaaaaaaaaagagatcacctgcctcattgtgtgaaagtttcaggttcatc 740
Query: 541 actcacaacaacaacaataaaaaaatattaaagagaaacaatattttctattaaggatgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 actcacaacaacaacaataaaaaaatattaaagagaaacaatattttctattaaggatgc 800
Query: 601 atttgaatatcagccatgtcagaaaaataaggtccaacttctccagattttaactaaaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 atttgaatatcagccatgtcagaaaaataaggtccaacttctccagattttaactaaaat 860
Query: 661 gattgaa 667
|||||||
Sbjct: 861 gattgaa 867
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
