Query= MSMg01no453_a17.b1 MSMg01no453_a17.b1 CHROMAT_FILE:
MSMg01no453_a17.b1 PHD_FILE: MSMg01no453_a17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:47 2005
(650 letters)
>mm_chr8_88971804_88972853
Length = 1050
Score = 1166 bits (603), Expect = 0.0
Identities = 640/657 (97%), Gaps = 9/657 (1%)
Strand = Plus / Minus
Query: 1 aaaacaaaaacaaaaacaaaaacaaaaaacccaaaaccctcagctgcttctcctagcagt 60
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aaaacaaaaac--aaacaaaaacaaaaaacccaaaaccctcagctgcttctcctagcagt 683
Query: 61 ttgggagagcatccgtctgctgaatggattccctcccacctcccgcctctctcctcccaa 120
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ttgggagagcatccatctgccgaatggattccctcccacctcccgcctctctcctcccaa 623
Query: 121 ccttacgctttatgggtggttcgtgcccaagcacacacacagtgcatttattttgttttc 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ccttactctttatgggtggttcgtgcccaagcacacacacagtgcatttattttgttttc 563
Query: 181 tctgttccttgtacagaaattacaaagtgataaattttcactctagaaataattaaacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tctgttccttgtacagaaattacaaagtgataaattttcactctagaaataattaaacta 503
Query: 241 gcatagaaatctatgttggaggaggtgaacacctcccttgcccacacctttgctgtcctt 300
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 502 gcatagaaatctatgttggaggaggtgaacgcctcccttgcccacacctttgctgtcctt 443
Query: 301 tgctttctgttacgataaactctaggaccaaaaaatgtttggggaagaaaagcatttagc 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 442 tgctttctgttacgataaactctaggaccaaaaaacgtttggggaagaaaagcatttagc 383
Query: 361 ttacccctcttatgccaaatgtaggctgcatgagaacaaagacgtcttgcatactctcat 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ttacccctcttatgtcaaatgtaggctgcatgagaacaaagacgtcttgcatactctcat 323
Query: 421 attcccaggtcgggggtcagcctgctgtatttattgagtgccaactgactggctgggtgc 480
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 attcccaggacgggggtcagcctgctgtatttattgagtgccaactgactggctgggtgc 263
Query: 481 atttgctattcaaaactttacaaatcgtggacat-------cactggacatacagaccca 533
|||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 262 atttgctattcaaaactttacaaatcgtggacattactccacactggacatacagaccca 203
Query: 534 cttcatgccataatctagaagtacttaacatgagggtctcctcactaagaggtgcctagg 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 cttcatgccataatctagaagtacttaacatgagggtctcctcactaagaggtgcctagg 143
Query: 594 ggtcttgccttacctcactgtgacatttctgggtacatatgcaatacacttggttca 650
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 142 ggtcttgccttacctcactgtgacatttctgggtacatgtgcaatacacttggttca 86
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_a17.g1 MSMg01no453_a17.g1 CHROMAT_FILE:
MSMg01no453_a17.g1 PHD_FILE: MSMg01no453_a17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:47 2005
(648 letters)
>mm_chr8_88805721_88806768
Length = 1048
Score = 1183 bits (612), Expect = 0.0
Identities = 639/648 (98%)
Strand = Plus / Plus
Query: 1 agtttctcattaggaaaggggaagggttggtgagaagacagataataaacagtaaagtaa 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtttctcattaggaaaggagaagggttggtgagaagacagataataaacagtaaagtaa 260
Query: 61 gtgaggtgtgtggtgtttgaatgagaatcgtccgggataggttcatgtatctgagcactt 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 261 gtgaggtgtgtggtgtttgaatgagaatcgtccgggacaggttcatgtatctgagcattt 320
Query: 121 ggccttgaaagtctgagtagagggatagcaggctctaatttccaataggaagatgaactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggccttgaaagtctgagtagagggatagcaggctctaatttccaataggaagatgaactc 380
Query: 181 tggctgctgggaagcaggaccaagagggagcaaatggctaagaagcccgcaggccactca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 tggctgctgggaagcaggaccaagagggagcaaatggctaagaagcccgcaggacactca 440
Query: 241 caaggcttagtagcacgtcttgcaagagatgtcaacagccaggcggtgctcttgtgggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaggcttagtagcacgtcttgcaagagatgtcaacagccaggcggtgctcttgtgggat 500
Query: 301 ctggacacaaactgaggcgagagccttcagagattcctcagtggctacatgagcagttca 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctggacacaaactgaggtgagagccttcagagattcctcagtggctacatgagcagttca 560
Query: 361 agaagaagacaggagtccagggacccaagcttttcacccaagcagctagagaatggagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaagaagacaggagtccagggacccaagcttttcacccaagcagctagagaatggagct 620
Query: 421 gagtatgatgggcggggaggcctctgattacaagtctgagggacaatcgggaactagcgt 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagtgtgatgggcggggaggcctctgattacaagtctgagggacaatcgggaactagcgt 680
Query: 481 agggtgttgctgagctgtcaagaatgcaggtggacatgagctggagctgaggaagaagcc 540
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 681 agggtgttgctgagctgtcaagaaggcagggggacatgagctggagctgaggaagaagcc 740
Query: 541 tgagaaggagatcattttttttccaccaaactgaaggtgattcctgggctccccacttcc 600
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 741 tgagaaggagatcattttttttccaccaaaccgaaggtgattcctgggctccccacttcc 800
Query: 601 aaatattatattgatttattttctgttacttcgataaaacaccatgtc 648
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aaatattatattgatttattttctgttacttcgataaaacaccatgtc 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
