Query= MSMg01no453_i09.b1 MSMg01no453_i09.b1 CHROMAT_FILE:
MSMg01no453_i09.b1 PHD_FILE: MSMg01no453_i09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:26 2005
(626 letters)
>mm_chr8_67117426_67118457
Length = 1032
Score = 1195 bits (618), Expect = 0.0
Identities = 626/632 (99%), Gaps = 6/632 (0%)
Strand = Plus / Plus
Query: 1 ggcctcaaactcaaagctatcctcctgccttaaccacccaagtgctaaccaccatgtcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggcctcaaactcaaagctatcctcctgccttaaccacccaagtgctaaccaccatgtcta 260
Query: 61 gcctgtccttgttaatgttttacaaaatcttgttctatagtaagaacattacatttctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctgtccttgttaatgttttacaaaatcttgttctatagtaagaacattacatttctgt 320
Query: 121 ttgtcatacagtcttcaaatgttttctctaaattgatttctcttttgtcatgcatttttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtcatacagtcttcaaatgttttctctaaattgatttctcttttgtcatgcatttttc 380
Query: 181 cacatagaagctcataatttgttaatgaaaaccatccaattcttttcttaagtggcatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacatagaagctcataatttgttaatgaaaaccatccaattcttttcttaagtggcatct 440
Query: 241 gggtgctttctctctttaaaagaaaaattaatcaaatacaaataaaatttttattgtatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggtgctttctctctttaaaagaaaaattaatcaaatacaaataaaatttttattgtatt 500
Query: 301 ttaattttcaaattcacaactttgtgccagcatgtgtgtgtg------ggggggtgggca 354
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 ttaattttcaaattcacaactttgtgccagcatgtgtgtgtgtgggggggggggtgggca 560
Query: 355 gggcagctggaagtctgttatgccaacttcatttttcctgattttttttcagagtgagag 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggcagctggaagtctgttatgccaacttcatttttcctgattttttttcagagtgagag 620
Query: 415 gacagtttatatagtcttttatgtagttaagactggcctcaaactcactatacagctaaa 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gacagtttatatagtcttttatgtagttaagactggcctcaaactcactatacagctaaa 680
Query: 475 gaagactttgaactccttgtcctcctgcctttgcctcccaagtattgaaattgcatgtgt 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaagactttgaactccttgtcctcctgcctttgcctcccaagtattgaaattgcatgtgt 740
Query: 535 ctgcttaatactggtgctgggaactgaacttgggtcctctggaagaagagcaagtgctct 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctgcttaatactggtgctgggaactgaacttgggtcctctggaagaagagcaagtgctct 800
Query: 595 taaccactgagctatctcttcagtcctatgac 626
||||||||||||||||||||||||||||||||
Sbjct: 801 taaccactgagctatctcttcagtcctatgac 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1032
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1022
Effective search space: 629552
Effective search space used: 629552
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_i09.g1 MSMg01no453_i09.g1 CHROMAT_FILE:
MSMg01no453_i09.g1 PHD_FILE: MSMg01no453_i09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:26 2005
(236 letters)
>mm_chr8_67336277_67336912
Length = 636
Score = 426 bits (220), Expect = e-124
Identities = 230/234 (98%), Gaps = 2/234 (0%)
Strand = Plus / Minus
Query: 3 gaattctagaacgaaacctttctgcttagggttgatctttctgggcatagccttttagtt 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gaattctagaacgaaacctttctgcttagggttgatctttctgggcatagccttttagtt 494
Query: 63 tataactgagggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgtgtctgtgtgta 122
||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 493 tataactgagggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt--gtgtgtctgtgtgta 436
Query: 123 agtccagtctctctctcaatactggtagctgaggctggagtcggacacttgccagataag 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 435 agtccagtctctctctcaatactggtagctgaggctggagtcggacacttgccagagaag 376
Query: 183 cactctacaaccgatctattcctctagccccctcttactacctgaaatgttgaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cactctacaaccgatctattcctctagccccctcttactacctgaaatgttgaa 322
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 9
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
