NNNNTTCCTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTGTGTTGTGAAGAAACTGAGGTCACAGGACACATGTCT
TGTTTCCTTGGAGTTTTCTCATATGTGCTCAGAATTCCCCTCACGGAAGT
CCATTCTTGGACTGTGTTCTGATTCTCTGGGAATAAGCCTGAACTTTTAT
AGGCCTACTTTCTGCTTTGAGGGTAAAGAGAACTAAGAAAACAGGCCTGA
CTGAGTTTTGAACTGCTAGGAACCAGCGGCTATCACCGCCCTTTTTTCTC
AGTTTTCAATGGCACTGTCTATTGTAATTCTCCTGTTCATATCATCTCAC
TCTACACTGCAGGCAAGAGAAAGTCGCTATATTTTTAGGCCAGAGAAACA
AACAGCACCAGAAAAAGTGTATCCATAATTTAAAGATGTAATTTAAAATC
TTCAAGTCTGAGCTACAGACAGCAATATAATAAGCCATGGGGTGAGAAGT
GGCAAAGTGTCAAAGTCCACCATTGCTATCATTGAGATATTGAACATTAT
GGCTAAGTCAGTGTCGGCATGAGAAAAACAAATTAAATATAACTCACACT
GACTTACACATTGGTTATCTATACAACTTAAAAAATGGAATTGTCACCAA
GTAACATAGGAAGGACTATGGGGACAGGTGGATTATGGAGTAAAATTGAG
AATCCAACATGTTAAACATGTACTCAGGAATGATGTGTAGGCTTCGAATN

NNNNCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTTTATC
TCATTTTTAAAGTGGGTTATTTGGTTCTATGGAGTGTAACTTCTTGAGTT
CTTTGTATGTATTGGGTATTAGCCCACTATAGGATGTAGGATTGGTAAAA
ATCTTTTCCCAATCTGTTGGTTGTTGACAGTGTCCTTTGCCTTACAGAAG
TTTTGCAATTTTATGAGGTCCTTTTTGTCGATTCTTAACCTTAGAGCATA
AGCTATTGGTGTTCTGTTCAGGAAATTTTTCTCTGTGCCCATGTGCTTGA
GGCTCTTCTCCACTTTCTTTTCTATTAGTTTCAGTTTATCTGTTGTGGAT
GCCAATAACTGCTTGCTGACAGGAGTCTGAAATATCTGTCTCCTGAGAGC
TCTGCCAGTACCTGACAAATACAGAGGTGGATGCTCTCAGCCAATAATTG
GACTGAGCACAGGGTCCCCAATGGAGGAGCTAGAAAAAGGACCCAAAGGA
GCTGAAGGGGTTTGCAGCCCCATAGGAGGAACACAATATGAATCAACCAG
TACCCCCAGGGCTCTCAGGGAGTAAACCACTTATCAAAGAGTACACATGG
AGGGACCCATGGCTCCAGCCACATATGTAGCAGAGGATGGCCTTGTGGGA
CATCAATGGGATGAGAGATCCTTAGTCCCGTGAATGCTTGATGCCCC

Query= MSMg01no453_i12.b1 MSMg01no453_i12.b1 CHROMAT_FILE:
MSMg01no453_i12.b1 PHD_FILE: MSMg01no453_i12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:26 2005
         (694 letters)



>mm_chr8_84917434_84918527
          Length = 1094

 Score = 1334 bits (690), Expect = 0.0
 Identities = 690/690 (100%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgtgttgtgaagaaactgaggtcacaggacacatgtcttgtttccttggagttt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtgttgtgaagaaactgaggtcacaggacacatgtcttgtttccttggagttt 264

                                                                       
Query: 65  tctcatatgtgctcagaattcccctcacggaagtccattcttggactgtgttctgattct 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctcatatgtgctcagaattcccctcacggaagtccattcttggactgtgttctgattct 324

                                                                       
Query: 125 ctgggaataagcctgaacttttataggcctactttctgctttgagggtaaagagaactaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctgggaataagcctgaacttttataggcctactttctgctttgagggtaaagagaactaa 384

                                                                       
Query: 185 gaaaacaggcctgactgagttttgaactgctaggaaccagcggctatcaccgcccttttt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaaaacaggcctgactgagttttgaactgctaggaaccagcggctatcaccgcccttttt 444

                                                                       
Query: 245 tctcagttttcaatggcactgtctattgtaattctcctgttcatatcatctcactctaca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctcagttttcaatggcactgtctattgtaattctcctgttcatatcatctcactctaca 504

                                                                       
Query: 305 ctgcaggcaagagaaagtcgctatatttttaggccagagaaacaaacagcaccagaaaaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctgcaggcaagagaaagtcgctatatttttaggccagagaaacaaacagcaccagaaaaa 564

                                                                       
Query: 365 gtgtatccataatttaaagatgtaatttaaaatcttcaagtctgagctacagacagcaat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtgtatccataatttaaagatgtaatttaaaatcttcaagtctgagctacagacagcaat 624

                                                                       
Query: 425 ataataagccatggggtgagaagtggcaaagtgtcaaagtccaccattgctatcattgag 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ataataagccatggggtgagaagtggcaaagtgtcaaagtccaccattgctatcattgag 684

                                                                       
Query: 485 atattgaacattatggctaagtcagtgtcggcatgagaaaaacaaattaaatataactca 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atattgaacattatggctaagtcagtgtcggcatgagaaaaacaaattaaatataactca 744

                                                                       
Query: 545 cactgacttacacattggttatctatacaacttaaaaaatggaattgtcaccaagtaaca 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cactgacttacacattggttatctatacaacttaaaaaatggaattgtcaccaagtaaca 804

                                                                       
Query: 605 taggaaggactatggggacaggtggattatggagtaaaattgagaatccaacatgttaaa 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 taggaaggactatggggacaggtggattatggagtaaaattgagaatccaacatgttaaa 864

                                         
Query: 665 catgtactcaggaatgatgtgtaggcttcg 694
           ||||||||||||||||||||||||||||||
Sbjct: 865 catgtactcaggaatgatgtgtaggcttcg 894


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1094
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1084
Effective search space:   741456
Effective search space used:   741456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)