Query= MSMg01no454_e13.b1 MSMg01no454_e13.b1 CHROMAT_FILE:
MSMg01no454_e13.b1 PHD_FILE: MSMg01no454_e13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:26 2005
(505 letters)
>mm_chr8_100857094_100857997
Length = 904
Score = 878 bits (454), Expect = 0.0
Identities = 493/506 (97%), Gaps = 3/506 (0%)
Strand = Plus / Minus
Query: 1 aagtctctagttgagcttcccagcatgagatacatttagcatgatgcatacaaccctata 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 881 aagtctctagttgagcttcccagcatgagatacatttagcatgatgcatacagccctata 822
Query: 61 ataccaaccctgacaatacaggcaggaagagcagaagttcaagcacatcctcag-ctgca 119
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||
Sbjct: 821 ataccaaccctgacaatacaggcaggaagagcagaagttcaagcacatccacagcct-ca 763
Query: 120 tagaaagttcatggccaccacgggctaccctacactttatctcagagaaatgcaaaaaca 179
||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 762 tagaaagttcatggccaccacgggccaccctacactttatctcagagaaatggaaaaaca 703
Query: 180 tgaagaaagattaaaaggatcttgtcaatctatttgctgccaaagtttaagtcactgaat 239
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 702 tgaagaaagattaaaaggatcttgtcaatatatttgctgccaaagtttaagtcactgaat 643
Query: 240 ggattgctattggtaggtcttatggttaaagggttgggaagctcttctagctgacgtggc 299
||||||| | |||||||||||||||||||||| || ||||||| ||||||||||||||||
Sbjct: 642 ggattgc-aatggtaggtcttatggttaaaggattaggaagctgttctagctgacgtggc 584
Query: 300 ctgaacatgaaacagtgttaagggaaaatagtttgccataaagtatttcttgttattgca 359
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 583 ctgaacatgaaacagtgttaagggaaaatagtttaccataaagtatttcttgttattgca 524
Query: 360 ttaaatgtgatcaaatttctttgaataagatatcaaactgaacaaattaataagtagcag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ttaaatgtgatcaaatttctttgaataagatatcaaactgaacaaattaataagtagcag 464
Query: 420 taaagtaatatacattggccagagatagcttctgctaatccttgtacattaagtccttca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 taaagtaatatacattggccagagatagcttctgctaatccttgtacattaagtccttca 404
Query: 480 gcaattctacactgagtgagcatgta 505
||||||||||||||||||||||||||
Sbjct: 403 gcaattctacactgagtgagcatgta 378
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 904
Length adjustment: 10
Effective length of query: 495
Effective length of database: 894
Effective search space: 442530
Effective search space used: 442530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no454_e13.g1 MSMg01no454_e13.g1 CHROMAT_FILE:
MSMg01no454_e13.g1 PHD_FILE: MSMg01no454_e13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:26 2005
(238 letters)
>mm_chr8_100676525_100677162
Length = 638
Score = 389 bits (201), Expect = e-113
Identities = 225/237 (94%), Gaps = 8/237 (3%)
Strand = Plus / Plus
Query: 1 ttcctgatcattctaagacttttatcatgaatgggtgttggattttgtcccatgctaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 ttcctgatcattctaagacttttatcatgaatgggtgttggattttgtcaaatgctaggt 260
Query: 61 tattaggacaccaagaaaatttaaaactgtcttgtgtatatagtttttgtatagggattg 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 tattaggacaccaagaaaatttaaaactgtcttgtgtatatagtttttatatagggattg 320
Query: 121 tctaggacaactttttagttatatttaaatagaacaactggtacattatttagcttttt- 179
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 tctaggacaactttttagttatctttaaatagaacaactggtacattatttagct----g 376
Query: 180 ---atttaaagatttagactaagaatggttttagttttaatctaccagcagatggtt 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aagatttaaagatttagactaagaatggttttagttttaatctaccagcagatggtt 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
