Query= MSMg01no455_c05.b1 MSMg01no455_c05.b1 CHROMAT_FILE:
MSMg01no455_c05.b1 PHD_FILE: MSMg01no455_c05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:33 2005
(329 letters)
>mm_chr8_41399946_41400674
Length = 729
Score = 629 bits (325), Expect = 0.0
Identities = 328/329 (99%)
Strand = Plus / Plus
Query: 1 taatagcattctgagagcaaactgtgcacacaagaaacagatttgggggagggtaaagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taatagcattctgagagcaaactgtgcacacaagaaacagatttgggggagggtaaagag 260
Query: 61 tcgctgtatgatagccttcagggggttggattttagctcattggtagagtgcttattaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcgctgtatgatagccttcagggggttggattttagctcattggtagagtgcttattaac 320
Query: 121 acacctaagatctatattttgtccccaactccaaaaaagaacacttgcagaatctttttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acacctaagatctatattttgtccccaactccaaaaaagaacacttgcagaatctttttg 380
Query: 181 tctctcgtgattcatatttacagtgttaactatgattttttttaataatgaaattttttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctctcgtgattcatatttacagtgttaactatgattttttttaataatgaaattttttt 440
Query: 241 tcacttttgtttgaaatgcagcatttaaaaggatcacagccttggctgttctagttgata 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 tcacttttgtttgaaatgcagcatttaacaggatcacagccttggctgttctagttgata 500
Query: 301 gattttcatgttgttgtttttattgagat 329
|||||||||||||||||||||||||||||
Sbjct: 501 gattttcatgttgttgtttttattgagat 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_c05.g1 MSMg01no455_c05.g1 CHROMAT_FILE:
MSMg01no455_c05.g1 PHD_FILE: MSMg01no455_c05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:33 2005
(636 letters)
>mm_chr8_41553474_41554508
Length = 1035
Score = 1222 bits (632), Expect = 0.0
Identities = 635/636 (99%), Gaps = 1/636 (0%)
Strand = Plus / Minus
Query: 1 ctataaaacttgaatttttttttttttactttttctttctccaattagtgaaaagccaga 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 ctataaaacttgaa-ttttttttttttactttttctttctccaattagtgaaaagccaga 777
Query: 61 attaaacttcaatctttatgtttctgtccttgatagactagaatctaaataatcttaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 attaaacttcaatctttatgtttctgtccttgatagactagaatctaaataatcttaaag 717
Query: 121 ctggcgcaaaagtctccacacagtgaatgtttaaacccttttccctttcctttgggaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 ctggcgcaaaagtctccacacagtgaatgtttaaacccttttccctttcctttgggaaaa 657
Query: 181 cataaaacgggcacacattcaggcacacgagcacatatgcttgcaagcacacatgtgaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 cataaaacgggcacacattcaggcacacgagcacatatgcttgcaagcacacatgtgaat 597
Query: 241 tcaagtagcatttagaggccttccagagccccctgaactatcaaatggatgtctgggagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 tcaagtagcatttagaggccttccagagccccctgaactatcaaatggatgtctgggagt 537
Query: 301 ccttttgatctccaaaggtccaactgaaggaatttcacctttataaacattaccgcagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ccttttgatctccaaaggtccaactgaaggaatttcacctttataaacattaccgcagag 477
Query: 361 ttaagacccagagggtgagaggcgatgttgcaccttgacttcgtacaggaaggagcagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ttaagacccagagggtgagaggcgatgttgcaccttgacttcgtacaggaaggagcagag 417
Query: 421 aagggcttttgaattacattatttgtttaacactaccttttaaatgtcataacatatttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aagggcttttgaattacattatttgtttaacactaccttttaaatgtcataacatatttt 357
Query: 481 gggctggaaagatggctcagtcattaaatgctaggctcacaaccaactatcatgatatat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gggctggaaagatggctcagtcattaaatgctaggctcacaaccaactatcatgatatat 297
Query: 541 tttattcaactaaaatatctagagatttaacaactgttttcttaggaacagaattgtatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tttattcaactaaaatatctagagatttaacaactgttttcttaggaacagaattgtatg 237
Query: 601 aatgtaattgaaactatgtatcctgtctattctacc 636
||||||||||||||||||||||||||||||||||||
Sbjct: 236 aatgtaattgaaactatgtatcctgtctattctacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1035
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1025
Effective search space: 641650
Effective search space used: 641650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
