Query= MSMg01no455_f24.b1 MSMg01no455_f24.b1 CHROMAT_FILE:
MSMg01no455_f24.b1 PHD_FILE: MSMg01no455_f24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:52 2005
(265 letters)
>mm_chr8_36103869_36104533
Length = 665
Score = 485 bits (251), Expect = e-142
Identities = 259/263 (98%), Gaps = 4/263 (1%)
Strand = Plus / Plus
Query: 5 gaattcatt--tttccacaattgccattctttaattataagcaatgttgaatgcattgtg 62
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatttgttt--acaattgccattctttaattataagcaatgttgaatgcattgtg 262
Query: 63 catatttgttatctatttatatagttcattggtttatgaatgatgttcagtttttgttaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 catatttgttatctatttatatagttcattggtttatgaatgatgttcagtttttgttaa 322
Query: 123 ttttaattgcattgatgtttcaattattgatttgtaagagttttttttggggggtataat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttttaattgcattgatgtttcaattattgatttgtaagagttttttttggggggtataat 382
Query: 183 aaaaaagtactcatctattatattaacttgttcatggttggaaggaatatttactgagtg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aaaaaagtactcatctattatattaacttgttcatggttggaaggaatatttactgagtg 442
Query: 243 cctattaggttgtaggtcctgga 265
|||||||||||||||||||||||
Sbjct: 443 cctattaggttgtaggtcctgga 465
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 265
Length of database: 665
Length adjustment: 9
Effective length of query: 256
Effective length of database: 656
Effective search space: 167936
Effective search space used: 167936
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no455_f24.g1 MSMg01no455_f24.g1 CHROMAT_FILE:
MSMg01no455_f24.g1 PHD_FILE: MSMg01no455_f24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:52 2005
(207 letters)
>mm_chr8_36289571_36290177
Length = 607
Score = 400 bits (207), Expect = e-116
Identities = 207/207 (100%)
Strand = Plus / Minus
Query: 1 tcatccatacaagcgggggtgcagctggtggtgaatgtaaaaatgtcacactcctcccga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 tcatccatacaagcgggggtgcagctggtggtgaatgtaaaaatgtcacactcctcccga 348
Query: 61 gtctcattcttccaggtggcctattcatcgtttcagcagagcccctttctgtctaatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gtctcattcttccaggtggcctattcatcgtttcagcagagcccctttctgtctaatcca 288
Query: 121 gataagctttgctaacagtagtgtctgggttgggatgtgagaaattagtgattctgtacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gataagctttgctaacagtagtgtctgggttgggatgtgagaaattagtgattctgtacc 228
Query: 181 aggtggctcggtgccttgaggaatggg 207
|||||||||||||||||||||||||||
Sbjct: 227 aggtggctcggtgccttgaggaatggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 207
Length of database: 607
Length adjustment: 9
Effective length of query: 198
Effective length of database: 598
Effective search space: 118404
Effective search space used: 118404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
