NCCCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAAAGAGGATCC
GCGGAATTCACACTTTCCCACACACACACACACACACACACACACACACA
CACACACACAGACACACACACACACTCACATATACACACACTTACATAAC
ATACACACACTTACAGAAATAATCATAGAAATAAATGAGTAGAAATTTCA
GGAACAAAACCTTTGTATTTGTAGCCCTAGAATTTTATATTTTATGACTA
CTTTTATATACCATATAGATTATACCTTTATCAAAAAATAGAATAAAACA
TGTTTATTAGCCTGTGGTTTTTAAGAATAAATATGCAACCATGATGATTA
AAAACATTTAGAGATCTGCTATTTCATAACACAAAACTCTTCACAAAATC
CTCCTTAAGCTTTATGCCTTTAATATTATTTTTTTTTCCATTTTTTATTA
GGTATTTAACTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATAT
CCACCCACCCCCACTCCCCTGCCCACCCACTCCCCCTTTTTGGCCCTGGT
ATTCCCCTGGACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCT
TTCCAGTGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGT
CAAGAGCTCCGGGGTACTGGTTAGCTCATAAAGTTGTTCCACCTATAGGA
TTGCAGAACCCTTTAGCTCCTTGGCTAN

NCTCGATGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCTTCTTCATATCAGCATCA
TAGACACAGAAACCAGCCCCAGTGCTGTCCCACTTCCCTTCTGCATTGAC
AGCGACTAGCTGTGCAGTTAATGCAGAACCCTCAGTGTGTTATCAGCAGT
AAAGAGGTCACACTCTGACAGCTTAGAAATCTAGGGATGCTAACTAGGCC
ATCAAAAATAAATGCAAAGACTTTTGATTTTCCGTCTACTCTACAACCAG
GTGGTTATTTTCTGACTTTGTCAAATTTCTTAAAAAAATAAGGGATTATA
AAGTTTGATAGGAAAATAGAGGAATTAACAACTAAATTAAAATTTTTAGC
TAGAATTAAATGAGATTGGTGGGAATATGAAAATTCCATGCAAGGGATGA
GAAATTACACTATTGACATATTCGCTTAGCATGAAGTAAGCTGGCAGGCT
GTATGCTTTCCTTAACTAGTAGTTTATTGCTGATTCCTAGATATTAGAAA
TCAAATCCTTATTGGGTATTTCTATGTGTCAATAACTGAGAGATAAATAA
AGATGAAGAGTTACATAGCATTTGATATCATGCCATGAATATTTGATTTG
AAATATGTTATGCCTAANATGAACCATAGAATTCATCTATTGTGAAATAC
TTATTCTATAATAGAAGGATTTTTCTAAGTT

Query= MSMg01no455_i05.g1 MSMg01no455_i05.g1 CHROMAT_FILE:
MSMg01no455_i05.g1 PHD_FILE: MSMg01no455_i05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:03 2005
         (599 letters)



>mm_chr8_6046050_6047048
          Length = 999

 Score = 1129 bits (584), Expect = 0.0
 Identities = 595/599 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atcttcttcatatcagcatcatagacacagaaaccagccccagtgctgtcccacttccct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 atcttcttcatatcagcatcatagacacagaaaccagccccagtgctgtcccacttccct 740

                                                                       
Query: 61  tctgcattgacagcgactagctgtgcagttaatgcagaaccctcagtgtgttatcagcag 120
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 739 tctgcattgacagcgactagctgtgaagttaatgcagaaccctcagtgtgttatcagcag 680

                                                                       
Query: 121 taaagaggtcacactctgacagcttagaaatctagggatgctaactaggccatcaaaaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 taaagaggtcacactctgacagcttagaaatctagggatgctaactaggccatcaaaaat 620

                                                                       
Query: 181 aaatgcaaagacttttgattttccgtctactctacaaccaggtggttattttctgacttt 240
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aaatgcaaagacttttgcttttccgtctactctacaaccaggtggttattttctgacttt 560

                                                                       
Query: 241 gtcaaatttcttaaaaaaataagggattataaagtttgataggaaaatagaggaattaac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gtcaaatttcttaaaaaaataagggattataaagtttgataggaaaatagaggaattaac 500

                                                                       
Query: 301 aactaaattaaaatttttagctagaattaaatgagattggtgggaatatgaaaattccat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aactaaattaaaatttttagctagaattaaatgagattggtgggaatatgaaaattccat 440

                                                                       
Query: 361 gcaagggatgagaaattacactattgacatattcgcttagcatgaagtaagctggcaggc 420
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 acaagggatgagaaattacactattgacatattcgcttagcatgaagtaagctggcaggc 380

                                                                       
Query: 421 tgtatgctttccttaactagtagtttattgctgattcctagatattagaaatcaaatcct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgtatgctttccttaactagtagtttattgctgattcctagatattagaaatcaaatcct 320

                                                                       
Query: 481 tattgggtatttctatgtgtcaataactgagagataaataaagatgaagagttacatagc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tattgggtatttctatgtgtcaataactgagagataaataaagatgaagagttacatagc 260

                                                                      
Query: 541 atttgatatcatgccatgaatatttgatttgaaatatgttatgcctaanatgaaccata 599
           |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 259 atttgatatcatgccatgaatatttgatttgaaatatgttatgcctaaaatgaaccata 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space:   582521
Effective search space used:   582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)